SYW_GEOSE_1_327

Tryptophan--tRNA ligase [Class-I aminoacyl-tRNA synthetase family]

ActiveICM:

L C E

Composition of the binding pockets

Protein chains monomer
 • A1 (SYW_GEOSE):5:9,11,17,18,21,22,40,43,111,125,129,132,133,141,143,144,146,147,176,180:183,192:1965:9,11,17,18,21,22,40,43,111,125,129,132,133,141,143,144,146,147,176,180:183,192:196

Full PDB list

1d2r,1i6k,1i6l,1i6m,1m83,1mau,1maw,1mb2,2ov4,3fhj,3u1v,5dk4 (redundant pocketome entry)

Contact map

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ligand
A1
F
5
S
6
G
7
I
8
Q
9
S
1
1
G
1
7
N
1
8
G
2
1
A
2
2
V
4
0
H
4
3
K
1
1
1
Y
1
2
5
M
1
2
9
D
1
3
2
I
1
3
3
V
1
4
1
V
1
4
3
G
1
4
4
D
1
4
6
Q
1
4
7
I
1
7
6
G
1
8
0
A
1
8
1
R
1
8
2
I
1
8
3
K
1
9
2
M
1
9
3
S
1
9
4
K
1
9
5
S
1
9
6
[1]5dk4.a 5bx,atp 50 . . . . . . . . . . . . . . * . . . . . . . . . . . . . * . . .
[1]1i6k.a tym 37 . . . . . . . . . . . . . . * . . . . . . . . . . . . . * . . .
[1]1mau.a atp,ltn 46 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]2ov4.a anl,aqp 42 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[2]3fhj.a amp,W 38 . . . . . - . . . . . . - . . . . . . . . . . . . . . . . . . .
[2]1d2r.b none . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]1m83.a atp 31 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]1i6m.a tym 37 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[2]1mb2.a W 15 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[2]3u1v.a none . . A . C T . R . . A S L H Y * . . . . Y G . . . . . S * Y Q .
[2]3u1v.d none . . A . C T . R . . A S L H Y * . . . . Y G . . . . . - - - - -

Legend

B backbone contact  S side chain contact  F BB + SCh
.
 no contact C covalent bond
X X X X X  clash
X mutation to X * complex cases - deletion
M contact with cofactors/metals (if any)
[icb] Download ICM binary file
[xml] Download XML file
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