SYV_THETH_192_338

Valine--tRNA ligase [Class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily]

ActiveICM:

L C E

Composition of the binding pockets

Protein chains monomer[show domain annotation]
 • A1 (SYV_THETH):R: Interaction with the Thr-AMP intermediate (261,264,269,270,272,276,278,279)
213:216,219,260,337
213:216,219,260,261,264,269,270,272,276,278,279,337

Full PDB list

1gax,1ivs,1wk9,1wka (redundant pocketome entry)

Contact map

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ligand
A1
A
2
1
3
T
2
1
4
V
2
1
5
R
2
1
6
T
2
1
9
V
2
6
0
E
2
6
1
F
2
6
4
L
2
6
9
K
2
7
0
T
2
7
2
D
2
7
6
L
2
7
8
D
2
7
9
Y
3
3
7
[1]1gax.b A 22 . . . . . . . . . . . . . . .
[1]1wk9.a tsb 30 . . . . . . . . . . . . . . .
[1]1wka.a none . . . . . . . . . . . . . . .

Legend

B backbone contact  S side chain contact  F BB + SCh
.
 no contact C covalent bond
X X X X X  clash
X mutation to X * complex cases - deletion
M contact with cofactors/metals (if any)
[icb] Download ICM binary file
[xml] Download XML file
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