SYT_ECOLI_239_642

Threonine--tRNA ligase [Class-II aminoacyl-tRNA synthetase family]

ActiveICM:

L C E

Composition of the binding pockets

Protein chains monomer[show domain annotation]
 • A1 (SYT_ECOLI):R: Catalytic (308,309,312,313,316,317,331,332,334,363,365,373:376,379,381,383,385,460,462,465,479,480,482,484,486,489,511:513,516,517,519,520)308,309,312,313,316,317,331,332,334,363,365,373:376,379,381,383,385,460,462,465,479,480,482,484,486,489,511:513,516,517,519,520
Metals (Me):Zn

Full PDB list

1evk,1evl,1fyf,1kog,1qf6,4hwo,4hwp,4hwr,4hws,4p3o,4p3p (redundant pocketome entry)

Contact map

[download in TSV format]
   
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ligand
A1 Me
G
3
0
8
H
3
0
9
N
3
1
2
Y
3
1
3
A
3
1
6
M
3
1
7
P
3
3
1
M
3
3
2
C
3
3
4
R
3
6
3
E
3
6
5
L
3
7
3
M
3
7
4
R
3
7
5
V
3
7
6
F
3
7
9
Q
3
8
1
D
3
8
3
H
3
8
5
A
4
6
0
Y
4
6
2
K
4
6
5
Q
4
7
9
C
4
8
0
T
4
8
2
Q
4
8
4
D
4
8
6
L
4
8
9
H
5
1
1
R
5
1
2
A
5
1
3
G
5
1
6
S
5
1
7
E
5
1
9
R
5
2
0
[1]4hws.a 1b3 29 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Zn
[1]4hwo.a 409 28 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Zn
[1]4hwp.a x16 29 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Zn
[1]4hwr.b 1b2 26 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Zn
[3]1qf6.a A,amp 45 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Zn
[1]1fyf.a ssa 29 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Zn
[2]1evk.a none . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Zn
[1]1evk.b T 8 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Zn
[2]4p3p.b 2cr 35 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Zn
[1]1kog.a tsb 30 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Zn

Legend

B backbone contact  S side chain contact  F BB + SCh
.
 no contact C covalent bond
X X X X X  clash
X mutation to X * complex cases - deletion
M contact with cofactors/metals (if any)
[icb] Download ICM binary file
[xml] Download XML file
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