SYP_METTH_2_472

Proline--tRNA ligase [Class-II aminoacyl-tRNA synthetase family. ProS type 3 subfamily]

ActiveICM:

L C E

Composition of the binding pockets

Protein chains monomer
 • A1 (SYP_METTH):117,119,148,150,158:160,163,166,168,170,212,232,234,235,237,265:267,269,271117,119,148,150,158:160,163,166,168,170,212,232,234,235,237,265:267,269,271
Metals (Me):Mg

Full PDB list

1nj1,1nj2,1nj5,1nj6

Contact map

[download in TSV format]
   
PDB.ch
   
ligand
A1 Me
T
1
1
7
E
1
1
9
R
1
4
8
E
1
5
0
I
1
5
8
R
1
5
9
V
1
6
0
I
1
6
3
F
1
6
6
E
1
6
8
H
1
7
0
F
2
1
2
Q
2
3
2
G
2
3
4
T
2
3
5
H
2
3
7
C
2
6
5
Y
2
6
6
G
2
6
7
S
2
6
9
R
2
7
1
[1]1nj5.a p5a 30 . . . . . . . . . . . . . . . . . . . . . Mg
[1]1nj1.a 5ca 29 . . . . . . . . . . . . . . . . . . . . . Mg
[1]1nj6.a a5a 28 . . . . . . . . . . . . . . . . . . . . . Mg
[1]1nj2.a none . . . . . . . . . . . . . . . . . . . . . Mg

Legend

B backbone contact  S side chain contact  F BB + SCh
.
 no contact C covalent bond
X X X X X  clash
X mutation to X * complex cases - deletion
M contact with cofactors/metals (if any)
[icb] Download ICM binary file
[xml] Download XML file
Similar entries
Feedback