SYK_HUMAN_69_581

Lysine--tRNA ligase [Class-II aminoacyl-tRNA synthetase family]

ActiveICM:

L C E

Composition of the binding pockets

Protein chains monomer
 • A1 (SYK_HUMAN):323,325,330:332,335,337,487,494:497,548,550,553,564323,325,330:332,335,337,487,494:497,548,550,553,564
Cofactors (cF):K
Metals (Me):Ca/Mg

Full PDB list

3bju,4dpg,4ycu,4ycw

Contact map

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ligand
A1 cF Me
R
3
2
3
E
3
2
5
T
3
3
0
H
3
3
1
N
3
3
2
F
3
3
5
T
3
3
7
E
4
8
7
E
4
9
4
I
4
9
5
C
4
9
6
N
4
9
7
G
5
4
8
G
5
5
0
R
5
5
3
I
5
6
4
[1]4ycu.a krs 21 . . . . . . . . . . . . . . . .
[1]4dpg.a apc,mg 28 . . . . . . . . . . . . . . . . K
[1]4dpg.b apc 31 . . . . . . . . . . . . . . . . K Mg
[1]3bju.a atp,ca,ca 33 . . . . . . . . . . . . . . . . K Ca
[1]4ycw.a krs 21 . . . . . . S . . . . . . . . . K

Legend

B backbone contact  S side chain contact  F BB + SCh
.
 no contact C covalent bond
X X X X X  clash
X mutation to X * complex cases - deletion
M contact with cofactors/metals (if any)
[icb] Download ICM binary file
[xml] Download XML file
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