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PPARA_HUMAN_197_468

Peroxisome proliferator-activated receptor alpha [Nuclear hormone receptor family. NR1 subfamily]

Composition of the binding site

Protein chains monomer [domain annotation]
A1 (PPARA_HUMAN):D: NR LBD (239, 241, 247, 248, 250:252, 254:258, 260:266, 269, 271:281, 283, 314, 317, 318, 321, 325, 330:333, 336, 337, 339, 344, 347, 351, 354, 355, 358, 359, 440, 444, 447, 448, 454:457, 459, 460, 464)
R: Required for heterodimerization with RXRA (314, 317, 318, 321, 325, 330:333, 336, 337, 339, 344, 347, 351, 354, 355, 358, 359)
239, 241, 247, 248, 250:252, 254:258, 260:266, 269, 271:281, 283, 314, 317, 318, 321, 325, 330:333, 336, 337, 339, 344, 347, 351, 354, 355, 358, 359, 440, 444, 447, 448, 454:457, 459, 460, 464

Full PDB list

1i7g, 1k7l, 1kkq, 2npa, 2p54, 2rew, 2znn, 3et1, 3fei, 3g8i, 3kdt, 3kdu, 3sp6, 3vi8, 4bcr, 4ci4, 5azt, 5hyk

Pocket contact map

[download in TSV format]
   
PDB.ch
   
ligand
A1
I
2
4
1
L
2
4
7
A
2
5
0
E
2
5
1
L
2
5
4
V
2
5
5
A
2
5
6
L
2
5
8
I
2
6
3
K
2
6
6
E
2
6
9
R
2
7
1
I
2
7
2
F
2
7
3
H
2
7
4
C
2
7
5
C
2
7
6
Q
2
7
7
C
2
7
8
T
2
7
9
S
2
8
0
T
2
8
3
Y
3
1
4
I
3
1
7
F
3
1
8
L
3
2
1
M
3
3
0
V
3
3
2
A
3
3
3
G
3
3
7
I
3
3
9
L
3
4
4
L
3
4
7
F
3
5
1
I
3
5
4
M
3
5
5
K
3
5
8
F
3
5
9
H
4
4
0
V
4
4
4
I
4
4
7
K
4
4
8
A
4
5
4
A
4
5
5
L
4
5
6
L
4
6
0
Y
4
6
4
[1]1i7g.a az228 . . . . . - - - - . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]1k7l.e 54438 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]1kkq.a 47145 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]2npa.a mmb32 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]2p54.a 73533 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]2rew.a rew38 . . . . . - - - - . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]2znn.a s4437 . . . . . . . . - . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]3et1.b et127 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]3fei.a ctm29 . . . . - - - - - . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]3g8i.a ro731 . . . . . . . . - . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]3kdt.b 7ha31 . . . . . . - - . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]3kdu.b nks37 . . . . . . - - . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]3sp6.a il226 . . . . . . . . - . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]3vi8.a 13m35 . . . . . . . . - . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]4bcr.a wy1,wy142 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]4ci4.a y1n30 . . . . . . - - - . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]5azt.a 4m525 . . . . . . . . . . . . . . . * . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]5hyk.a 65w23 . . . . . . . . - . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .

Legend

B backbone contact  S side chain contact  F BB + SCh
.
 no contact C covalent bond
X mutation to X * complex cases - deletion
M contact with cofactors/metals (if any)

Site contact map

[download in TSV format]
   
PDB.ch
A1
F
2
3
9
I
2
4
1
L
2
4
7
C
2
4
8
A
2
5
0
E
2
5
1
K
2
5
2
L
2
5
4
V
2
5
5
A
2
5
6
K
2
5
7
L
2
5
8
A
2
6
0
N
2
6
1
G
2
6
2
I
2
6
3
Q
2
6
4
N
2
6
5
K
2
6
6
E
2
6
9
R
2
7
1
I
2
7
2
F
2
7
3
H
2
7
4
C
2
7
5
C
2
7
6
Q
2
7
7
C
2
7
8
T
2
7
9
S
2
8
0
V
2
8
1
T
2
8
3
Y
3
1
4
I
3
1
7
F
3
1
8
L
3
2
1
M
3
2
5
M
3
3
0
L
3
3
1
V
3
3
2
A
3
3
3
N
3
3
6
G
3
3
7
I
3
3
9
L
3
4
4
L
3
4
7
F
3
5
1
I
3
5
4
M
3
5
5
K
3
5
8
F
3
5
9
H
4
4
0
V
4
4
4
I
4
4
7
K
4
4
8
A
4
5
4
A
4
5
5
L
4
5
6
H
4
5
7
L
4
5
9
L
4
6
0
Y
4
6
4
[1]1i7g.a . . . . . . . . - - - - - - - - * . . . . . * . . . . . . . . . . . . . . . . . . . . . . . . . * . . . . . . . . . . . . .
[1]1k7l.e . . . . . . . . . . . * . . . . . . . . . . * . * . . . . . . . . . . . . . . . . . . . . . . . * . . . . . . . . * . . . *
[1]1kkq.a . . . . . * . . . . . . . . . . . . . . . . * . . . . . . . . . . . . . . . . . . . . . . . . . * . . . . . . . . . . . . .
[1]2npa.a . . . . . . . * . . . . . . . * . . . . . . * . * . . . . . . . . . . . . . . . . . . . . . . . * . . . . . . . . . . . . *
[1]2p54.a . . . . . . . . . . . * . . . . . . . . . . * . * . . . . * . . . . . . . . . . . . . . . . . . * . . . . . . . . . . . . .
[1]2rew.a . . . . . . . * - - - - - - - - * . . . . . * . * . . . . . . . . . . . . . . . . . . . . . . . * . . . . . . . . . . . . .
[1]2znn.a . . . . . . . * . . . * . . . - - . . . . . * . * . . . . . . . . . . . . . . . . . . . . . . . * . . . . . . . . . . . . .
[1]3et1.b . . . . . . . . . . . . . . . * * . . . . . * . * . . . . . . . * . . . . . . . . . . . . . . . * . . . . . . . . . . . . *
[1]3fei.a . . . . . . - - - - - - - - - - - - . . . . * . . . . . . . . . . . . . . . . . . . . . . . . . * . . . . . . . . . . . . .
[1]3g8i.a . . . . . . . * * . . . - - - - - - . . . . * . * . . . . . . . . . . . . . . . . . . . . . . . * . . . . . . . . . . . . .
[1]3kdt.b . . . . . . . * . - - - . . . . . . . . . . * . * . . . . . . . . . . . . . . . . . . . . . . . * . . . . . . . . . . . . .
[1]3kdu.b . . . . . . . * . - - - . . . * . . . . . . * . * . . . . . . . . . . . . . . . . . . . . . . . * . . . . . . . . . . . . *
[1]3sp6.a . . . . . . . . . . . * . . - - - . * . . . * . * . . . . . . . . . . . . . . . . . . . . . . . * . . . . . . . . . . . . .
[1]3vi8.a . . . . . . . * . . . * . . . - - . . . . . * . . . . . . . . . . . . . . . . . . . . . . . . . * . . . . . . . . . . . . .
[1]4bcr.a . . . . . . . . . . . . . . . . . . . . . . * . . . . . . . . . . . . . . * . . . . . . . . . . * . . . . . . . . . . . . .
[1]4ci4.a . . . . . . . * . - - - - - - - - - . . . . * . * . . . . . . . . . . . . . . . . . . . . . . . * . . . . . . . . . . . . .
[1]5azt.a . . . . . . . . . . . . . . . * . . . . . . * . * . . . . . . . . . . . . . . . . . . . . . . * * * . . . . . . . . . . . *
[1]5hyk.a . . . . . . . * * . * * - - - - - . . . . . * . * * . . . * . . . . . . . . . . . . . . . . . . * . . . . . . . . . . . * .

Legend

B backbone contact  S side chain contact  F BB + SCh
.
 no contact C covalent bond
X X X X X  clash
X mutation to X * complex cases - deletion
M contact with cofactors/metals (if any)

Pocket-ligand steric compatibility

Ligands (x) vs pockets (y) colored by number of steric clashes

zoom: [−] [+]; [view as image]; [download as text]

pocketligand
≥10
9
8
7
6
5
4
3
2
1
0
1i7g.a:az2
1k7l.e:544
1kkq.a:471
2npa.a:mmb
2p54.a:735
2rew.a:rew
2znn.a:s44
3et1.b:et1
3fei.a:ctm
3g8i.a:ro7
3kdt.b:7ha
3kdu.b:nks
3sp6.a:il2
3vi8.a:13m
4bcr.a:wy1
4ci4.a:y1n
5azt.a:4m5
5hyk.a:65w
[1] 1i7g.a
0.1
0.6 3.1 0.5 0.7 2.3 2.3 0.7 0.1 1.0 0.5 0.6 0.3 1.4 2.7 0.5 0.8 5.9
[1] 1k7l.e 0.4
0.2
3.4 0.3 0.7 1.8 2.4 0.8 0.5 1.4 0.5 0.1 0.2 1.4 4.3 1.1 1.0 5.3
[1] 1kkq.a 0.2 0.2
0
0.1 0.5 0.3 2.4 0.3 0.2 1.1 0.3 0.6 0.1 1.4 4.3 0.2 2.5 4.9
[1] 2npa.a 0.9 0.4 4.2
0
0.8 2.5 2.5 1.0 0.4 1.2 0.8 0.5 0.3 1.5 5.5 1.2 0.8 4.6
[1] 2p54.a 0.8 1.2 3.1 0.6
0
2.5 2.2 0.8 0.4 1.2 0.5 0.6 0.1 1.3 2.5 0.3 1.2 4.9
[1] 2rew.a 0.7 4.9 6.8 2.8 0.6
0.1
2.1 4.2 0.4 1.4 0.2 4.0 0.2 1.9 3.5 0.9 1.2 1.0
[1] 2znn.a 0.2 1.8 3.8 1.1 0.2 2.4
0
1.0 0.3 0.1 0.5 1.0 0.1 0.1 3.3 0.3 1.2 5.1
[1] 3et1.b 1.5 1.1 3.9 0.5 1.4 2.2 2.5
0.4
0.9 1.4 0.8 0.5 0.5 2.2 4.9 1.8 0.6 4.4
[1] 3fei.a 0.3 1.4 3.6 1.0 0.8 2.9 2.1 1.3
0.3
1.4 0.7 1.1 0.6 1.6 2.4 0.9 0.9 5.7
[1] 3g8i.a 0.6 1.6 4.4 1.3 1.3 3.2 0.5 0.9 0.6
0
1.2 1.3 0.2 0.5 3.1 1.1 2.7 5.4
[1] 3kdt.b 0.3 1.1 3.1 0.7 0.3 1.9 1.9 1.4 0.1 1.6
0.3
0.3 0.2 1.3 2.2 0.4 1.3 3.7
[1] 3kdu.b 0.9 0.7 3.2 0.1 0.7 2.1 2.2 0.8 0.4 1.4 0.5
0.1
0.4 2.0 3.5 1.1 1.9 4.6
[1] 3sp6.a 1.0 1.2 3.9 0.6 0.4 2.4 2.5 1.0 0.4 1.0 0.5 0.8
0.2
1.8 3.9 0.9 0.8 5.4
[1] 3vi8.a 0.6 1.9 4.8 1.4 0.4 2.7 0.4 1.7 0.4 0.2 0.5 1.5 0.3
0
3.2 0.7 1.7 5.0
[1] 4bcr.a 1.3 1.8 3.6 1.7 0.9 2.9 2.9 0.9 1.5 2.2 1.3 1.6 0.8 2.2
0.3
1.1 1.0 5.5
[1] 4ci4.a 0.4 0.9 3.1 0.9 0.3 2.0 2.5 0.9 0.2 1.5 0.3 0.9 0.2 1.5 1.5
0.2
1.5 4.8
[1] 5azt.a 1.5 2.1 5.3 1.5 1.2 3.1 2.7 1.5 1.2 2.0 1.3 1.3 0.6 2.2 4.5 1.9
0.4
5.3
[1] 5hyk.a 1.5 6.4 9.5 5.0 2.5 1.9 3.6 5.4 2.1 2.5 1.6 5.4 1.4 3.0 6.1 2.3 3.3
0
[Pocket-ligand steric clashes matrix]

Pocket clash dissimilarity (1 cluster)

Pockets (x) vs pockets (y) colored by ligand clash profile difference

zoom: [−] [+]; [view as image]; [download as text]

pocketpocket
≥1.
.9
.8
.7
.6
.5
.4
.3
.2
.1
.0
1i7g.a
1k7l.e
1kkq.a
2npa.a
2p54.a
2rew.a
2znn.a
3et1.b
3fei.a
3g8i.a
3kdt.b
3kdu.b
3sp6.a
3vi8.a
4bcr.a
4ci4.a
5azt.a
5hyk.a
[1] 1i7g.a
0
.15 .19 .18 .14 .09 .13 .15 .09 .14 .13 .15 .13 .14 .10 .12 .18 .22
[1] 1k7l.e .15
0
.21 .13 .11 .14 .11 .13 .12 .12 .14 .09 .09 .12 .14 .12 .16 .19
[1] 1kkq.a .19 .21
0
.23 .17 .19 .19 .24 .16 .20 .18 .17 .21 .21 .16 .16 .24 .27
[1] 2npa.a .18 .13 .23
0
.13 .16 .15 .08 .15 .14 .13 .11 .16 .15 .14 .14 .14 .24
[1] 2p54.a .14 .11 .17 .13
0
.14 .10 .15 .12 .11 .12 .11 .09 .10 .07 .07 .16 .17
[1] 2rew.a .09 .14 .19 .16 .14
0
.13 .15 .12 .13 .13 .10 .14 .14 .14 .11 .19 .19
[1] 2znn.a .13 .11 .19 .15 .10 .13
0
.17 .11 .09 .11 .13 .09 .04 .12 .12 .19 .13
[1] 3et1.b .15 .13 .24 .08 .15 .15 .17
0
.16 .17 .14 .12 .14 .16 .14 .14 .12 .25
[1] 3fei.a .09 .12 .16 .15 .12 .12 .11 .16
0
.11 .10 .12 .12 .11 .08 .10 .15 .21
[1] 3g8i.a .14 .12 .20 .14 .11 .13 .09 .17 .11
0
.13 .11 .11 .10 .12 .11 .16 .16
[1] 3kdt.b .13 .14 .18 .13 .12 .13 .11 .14 .10 .13
0
.10 .15 .11 .11 .10 .16 .18
[1] 3kdu.b .15 .09 .17 .11 .11 .10 .13 .12 .12 .11 .10
0
.12 .13 .14 .09 .13 .19
[1] 3sp6.a .13 .09 .21 .16 .09 .14 .09 .14 .12 .11 .15 .12
0
.10 .10 .12 .16 .18
[1] 3vi8.a .14 .12 .21 .15 .10 .14 .04 .16 .11 .10 .11 .13 .10
0
.13 .10 .18 .15
[1] 4bcr.a .10 .14 .16 .14 .07 .14 .12 .14 .08 .12 .11 .14 .10 .13
0
.10 .16 .19
[1] 4ci4.a .12 .12 .16 .14 .07 .11 .12 .14 .10 .11 .10 .09 .12 .10 .10
0
.14 .20
[1] 5azt.a .18 .16 .24 .14 .16 .19 .19 .12 .15 .16 .16 .13 .16 .18 .16 .14
0
.27
[1] 5hyk.a .22 .19 .27 .24 .17 .19 .13 .25 .21 .16 .18 .19 .18 .15 .19 .20 .27
0
[Pocket clash dissimilarity matrix]

Site backbone RMSD (median 1.5 Å)

Pockets (x) vs pockets (y) colored by RMSD of site residue backbone atoms

zoom: [−] [+]; [view as image]; [download as text]

pocketpocket
≥10 Å
9 Å
8 Å
7 Å
6 Å
5 Å
4 Å
3 Å
2 Å
1 Å
0 Å
1i7g.a
1k7l.e
1kkq.a
2npa.a
2p54.a
2rew.a
2znn.a
3et1.b
3fei.a
3g8i.a
3kdt.b
3kdu.b
3sp6.a
3vi8.a
4bcr.a
4ci4.a
5azt.a
5hyk.a
[1] 1i7g.a
0
1.0 3.8 0.8 1.2 0.7 0.6 1.0 0.5 0.6 0.8 0.8 0.7 0.6 1.2 0.8 1.1 1.0
[1] 1k7l.e 1.0
0
3.6 2.2 0.9 0.8 1.1 2.9 0.7 1.2 1.5 1.4 0.9 1.1 1.1 0.8 3.0 1.4
[1] 1kkq.a 3.8 3.6
0
4.3 3.6 3.7 3.8 4.8 3.7 4.0 4.1 4.0 3.8 3.7 3.7 3.9 5.1 4.2
[1] 2npa.a 0.8 2.2 4.3
0
2.6 0.8 2.3 1.1 0.6 1.2 1.6 1.5 2.1 2.3 2.4 1.2 2.5 1.6
[1] 2p54.a 1.2 0.9 3.6 2.6
0
0.8 1.0 3.2 0.8 1.4 1.7 1.6 0.8 1.0 1.0 0.6 3.4 1.5
[1] 2rew.a 0.7 0.8 3.7 0.8 0.8
0
0.6 1.1 0.5 0.5 0.6 0.5 0.5 0.6 0.9 0.6 1.1 0.9
[1] 2znn.a 0.6 1.1 3.8 2.3 1.0 0.6
0
2.9 0.5 1.0 1.6 1.6 0.5 0.3 1.2 0.7 3.2 1.2
[1] 3et1.b 1.0 2.9 4.8 1.1 3.2 1.1 2.9
0
0.8 1.4 2.0 2.0 2.5 2.9 2.9 1.2 2.3 1.7
[1] 3fei.a 0.5 0.7 3.7 0.6 0.8 0.5 0.5 0.8
0
0.4 0.7 0.7 0.6 0.5 0.7 0.7 0.8 1.1
[1] 3g8i.a 0.6 1.2 4.0 1.2 1.4 0.5 1.0 1.4 0.4
0
0.7 0.6 1.1 1.0 1.4 0.6 1.6 1.2
[1] 3kdt.b 0.8 1.5 4.1 1.6 1.7 0.6 1.6 2.0 0.7 0.7
0
0.6 1.2 1.6 1.6 0.7 2.0 0.9
[1] 3kdu.b 0.8 1.4 4.0 1.5 1.6 0.5 1.6 2.0 0.7 0.6 0.6
0
1.2 1.6 1.6 0.7 1.9 0.9
[1] 3sp6.a 0.7 0.9 3.8 2.1 0.8 0.5 0.5 2.5 0.6 1.1 1.2 1.2
0
0.5 0.9 0.6 2.9 1.2
[1] 3vi8.a 0.6 1.1 3.7 2.3 1.0 0.6 0.3 2.9 0.5 1.0 1.6 1.6 0.5
0
1.2 0.7 3.2 1.2
[1] 4bcr.a 1.2 1.1 3.7 2.4 1.0 0.9 1.2 2.9 0.7 1.4 1.6 1.6 0.9 1.2
0
0.8 3.1 1.6
[1] 4ci4.a 0.8 0.8 3.9 1.2 0.6 0.6 0.7 1.2 0.7 0.6 0.7 0.7 0.6 0.7 0.8
0
1.2 0.8
[1] 5azt.a 1.1 3.0 5.1 2.5 3.4 1.1 3.2 2.3 0.8 1.6 2.0 1.9 2.9 3.2 3.1 1.2
0
2.2
[1] 5hyk.a 1.0 1.4 4.2 1.6 1.5 0.9 1.2 1.7 1.1 1.2 0.9 0.9 1.2 1.2 1.6 0.8 2.2
0
[Binding site backbone RMSD matrix]

Site full-atom RMSD (median 1.1 Å)

Pockets (x) vs pockets (y) colored by RMSD of all site residue atoms

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pocketpocket
≥10 Å
9 Å
8 Å
7 Å
6 Å
5 Å
4 Å
3 Å
2 Å
1 Å
0 Å
1i7g.a
1k7l.e
1kkq.a
2npa.a
2p54.a
2rew.a
2znn.a
3et1.b
3fei.a
3g8i.a
3kdt.b
3kdu.b
3sp6.a
3vi8.a
4bcr.a
4ci4.a
5azt.a
5hyk.a
[1] 1i7g.a
0
1.8 4.3 1.4 1.8 1.0 0.9 1.7 1.1 1.2 1.0 1.0 1.1 0.9 1.8 1.1 1.9 1.6
[1] 1k7l.e 1.8
0
4.1 2.4 1.2 1.6 1.5 3.0 0.9 1.6 1.6 1.5 1.4 1.5 1.6 1.1 3.3 1.8
[1] 1kkq.a 4.3 4.1
0
4.7 4.1 4.4 4.2 5.1 4.2 4.5 4.4 4.3 4.2 4.2 4.2 4.3 5.4 4.7
[1] 2npa.a 1.4 2.4 4.7
0
2.6 1.5 2.4 1.7 1.0 1.7 1.7 1.7 2.3 2.4 2.6 1.4 3.0 2.0
[1] 2p54.a 1.8 1.2 4.1 2.6
0
1.6 1.4 3.2 1.1 1.7 1.6 1.6 1.2 1.4 1.4 0.9 3.5 1.9
[1] 2rew.a 1.0 1.6 4.4 1.5 1.6
0
1.1 1.6 1.2 1.2 1.0 1.0 1.2 1.0 1.7 1.1 1.9 1.1
[1] 2znn.a 0.9 1.5 4.2 2.4 1.4 1.1
0
2.9 1.1 1.6 1.5 1.4 1.1 0.5 1.6 1.1 3.4 1.9
[1] 3et1.b 1.7 3.0 5.1 1.7 3.2 1.6 2.9
0
1.3 1.9 2.2 2.2 2.8 2.9 3.0 1.5 2.6 2.4
[1] 3fei.a 1.1 0.9 4.2 1.0 1.1 1.2 1.1 1.3
0
0.7 1.1 1.1 1.0 1.1 1.2 1.0 1.3 1.5
[1] 3g8i.a 1.2 1.6 4.5 1.7 1.7 1.2 1.6 1.9 0.7
0
1.2 1.1 1.6 1.5 1.8 1.0 2.4 1.9
[1] 3kdt.b 1.0 1.6 4.4 1.7 1.6 1.0 1.5 2.2 1.1 1.2
0
0.7 1.4 1.4 1.6 1.0 2.4 1.4
[1] 3kdu.b 1.0 1.5 4.3 1.7 1.6 1.0 1.4 2.2 1.1 1.1 0.7
0
1.4 1.4 1.6 0.9 2.3 1.5
[1] 3sp6.a 1.1 1.4 4.2 2.3 1.2 1.2 1.1 2.8 1.0 1.6 1.4 1.4
0
1.0 1.2 1.0 3.2 1.8
[1] 3vi8.a 0.9 1.5 4.2 2.4 1.4 1.0 0.5 2.9 1.1 1.5 1.4 1.4 1.0
0
1.5 1.1 3.4 1.8
[1] 4bcr.a 1.8 1.6 4.2 2.6 1.4 1.7 1.6 3.0 1.2 1.8 1.6 1.6 1.2 1.5
0
1.2 3.2 2.2
[1] 4ci4.a 1.1 1.1 4.3 1.4 0.9 1.1 1.1 1.5 1.0 1.0 1.0 0.9 1.0 1.1 1.2
0
1.7 1.3
[1] 5azt.a 1.9 3.3 5.4 3.0 3.5 1.9 3.4 2.6 1.3 2.4 2.4 2.3 3.2 3.4 3.2 1.7
0
3.1
[1] 5hyk.a 1.6 1.8 4.7 2.0 1.9 1.1 1.9 2.4 1.5 1.9 1.4 1.5 1.8 1.8 2.2 1.3 3.1
0
[Binding site full-atom RMSD matrix]







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[ENTRY 2D visualization]

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