OPSD_HUMAN_1_348_Galpha

Rhodopsin [G-protein coupled receptor 1 family. Opsin subfamily]

ActiveICM:

L C E

Composition of the binding pockets

Protein chains monomer
 • A1 (OPSD_HUMAN):66,67,69,70,72,135,138:141,145,150,226,229,230,233,237,242,243,245:247,249,250,253,257,310:312,345,34766,67,69,70,72,135,138:141,145,150,226,229,230,233,237,242,243,245:247,249,250,253,257,310:312,345,347

Full PDB list

1f88,1gzm,1hzx,1l9h,1u19,2g87,2hpy,2j4y,2ped,2x72,3c9l,3c9m,3cap,3dqb,3oax,3pqr,3pxo,4a4m,4bey,4bez,4j4q,4pxf,4x1h,4zwj,5dys,5en0 (redundant pocketome entry)

Contact map

[download in TSV format]
   
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ligand
A1
K
6
6
K
6
7
R
6
9
T
7
0
L
7
2
R
1
3
5
V
1
3
8
V
1
3
9
C
1
4
0
K
1
4
1
N
1
4
5
E
1
5
0
L
2
2
6
T
2
2
9
V
2
3
0
A
2
3
3
Q
2
3
7
T
2
4
2
T
2
4
3
K
2
4
5
A
2
4
6
E
2
4
7
E
2
4
9
V
2
5
0
M
2
5
3
M
2
5
7
N
3
1
0
K
3
1
1
Q
3
1
2
V
3
4
5
P
3
4
7
[1]2x72.a ILENLKDCGLF 88 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . - -
[2]1hzx.a bng 21 . . . . . . . . . . . . . . . . - . . . . . . . . . . . . . .
[3]1gzm.a none . . . . . . . . . . . . . . . . . . . . . . . . . . . . . - -
[1]4j4q.a ILENLKDVGLF 89 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . - -
[1]4x1h.a VLEDLKSCGLF 85 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . - -
[1]4pxf.a DIDVMGL 51 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . - -
[2]2g87.a none . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]4zwj.a Y-IDVMGLTFR-Y 87 . . . . . . . . . . . . . . . . . . . . . . . . . Y . . . - -
[1]4zwj.b Y-IDVMGLTFRR-Y 96 . . . . . . . . . . . . . . . . . . . . . . . . . Y . . . - -
[1]4zwj.c Y-DVMGLTFRR-Y 90 . . . . . . . . . . . . . . . . . . . . . . . . . Y . . . - -
[1]4a4m.a ILENLKDCGLF 88 . . . . . . . . . . . . . . . . . . . . . . . . . Y . . . - -

Legend

B backbone contact  S side chain contact  F BB + SCh
.
 no contact C covalent bond
X X X X X  clash
X mutation to X * complex cases - deletion
M contact with cofactors/metals (if any)
[icb] Download ICM binary file
[xml] Download XML file
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