NR1D2_HUMAN_385_579_ligBind

Nuclear receptor subfamily 1 group D member 2 [Nuclear hormone receptor family. NR1 subfamily]

ActiveICM:

L C E

Composition of the binding pockets

Protein chains monomer[show domain annotation]
 • A1 (NR1D2_HUMAN):R: Ligand-binding (381:386,402,405,409,413,443,446,447,450,454,479,480,482,483,486,568)
R: Interaction with ZNHIT1 (402,405,409,413,443,446,447,450,454,479,480,482,483,486,568,571,572,575)
381:386,402,405,409,413,443,446,447,450,454,479,480,482,483,486,568,571,572,575

Full PDB list

2v0v,2v7c,3cqv,4n73

Contact map

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ligand
A1
H
3
8
1
L
3
8
2
V
3
8
3
C
3
8
4
P
3
8
5
L
3
8
6
W
4
0
2
F
4
0
5
F
4
0
9
V
4
1
3
F
4
4
3
L
4
4
6
M
4
4
7
F
4
5
0
F
4
5
4
A
4
7
9
G
4
8
0
L
4
8
2
L
4
8
3
M
4
8
6
H
5
6
8
E
5
7
1
L
5
7
2
F
5
7
5
[1]3cqv.a fe,hem 43 . . . . . * . . . . . . * . . . . . . * . . . .
[2]2v0v.a none - - - - - - . . . . . . . . . . . . . . . . . .
[2]2v7c.b none - - - - - - . . . . . . * . . . . . . * . . . -
[1]4n73.a co,coh 43 . . . . . M . . . . . . . . . . . . . . . . . .

Legend

B backbone contact  S side chain contact  F BB + SCh
.
 no contact C covalent bond
X X X X X  clash
X mutation to X * complex cases - deletion
M contact with cofactors/metals (if any)
[icb] Download ICM binary file
[xml] Download XML file
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