If you see this message after the page is completely loaded, then JavaScript is not supported or disabled in your browser. Please consider enabling JavaScript for this site.

NGAL_HUMAN_15_198

Neutrophil gelatinase-associated lipocalin [Calycin superfamily. Lipocalin family]

Composition of the binding site

Protein chains monomer
A1 (NGAL_HUMAN):23, 24, 53, 56, 60:62, 69, 72, 74, 86, 88, 90:92, 97:99, 101, 103, 114, 120, 123, 126, 143:145, 147, 150, 152:154, 156, 15823, 24, 53, 56, 60:62, 69, 72, 74, 86, 88, 90:92, 97:99, 101, 103, 114, 120, 123, 126, 143:145, 147, 150, 152:154, 156, 158
Metals (Me):Eu/Fe/Sm/Zr

Full PDB list

1dfv, 1l6m, 1qqs, 1x71, 1x89, 1x8u, 3by0, 3cbc, 3cmp, 3dsz, 3dtq, 3fw4, 3fw5, 3hwd, 3hwe, 3hwf, 3hwg, 3i0a, 3k3l, 3pec, 3ped, 3t1d, 3tf6, 3tzs, 3u03, 3u0d, 4k19, 4zfx, 4zhc, 4zhd, 4zhf, 4zhg, 4zhh, 5jr8, 5khp, 5kic, 5kid, 5mhh (redundant Pocketome entry)

Pocket contact map

[download in TSV format]
   
PDB.ch
   
ligand
A1 Me
V
5
3
L
5
6
A
6
0
I
6
1
Q
6
9
Y
7
2
T
7
4
V
8
6
S
8
8
L
9
0
R
9
2
D
9
7
W
9
9
R
1
0
1
F
1
0
3
L
1
1
4
Y
1
2
0
L
1
2
3
Y
1
2
6
F
1
4
3
K
1
4
4
K
1
4
5
S
1
4
7
Y
1
5
2
F
1
5
3
K
1
5
4
T
1
5
6
Y
1
5
8
[1]1l6m.a dbh,dbh,dbs39 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Fe
[1]1l6m.c dbh,dbs28 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Fe
[1]1qqs.a dka12 . . . . . . . . . . . . A . . . . . . . . . . . . . . .
[1]1x71.a db1,db122 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Fe
[1]1x71.c db111 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Fe
[1]1x89.a cm153 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Fe
[1]1x8u.a cm252 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Fe
[1]3by0.a dbh,dbh,dbs39 . . . . . . . . . . . . A A . . . . . . . . . . . . . . Fe
[1]3by0.b dbh11 . . . . . . . . . . - . A A . . . . . . . . . . . . . . Fe
[1]3by0.c dbh,dbs,dbs45 . . . . . . . . . . . . A A . . . . . . . . . . . . . . Fe
[1]3cbc.c dbs,na18 . . . . . . . . . . . . . . . . . . F . . . . . . . . .
[1]3cmp.a eb4,na49 . . . . . . . . . . . . . . . . . . . . . A . . . . . . Fe
[1]3cmp.b dbh,dbh,na23 . . . . . . . . . . . . . . . . . . . . . A . . . . . . Fe
[1]3cmp.c eb4,na,na50 . . . . . . . . . . . . . . . . . . . . . A . . . . . . Fe
[1]3fw4.c caq8 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Fe
[1]3fw5.c mct9 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Fe
[1]3hwd.a none . . . . . . . . . . . . . . . . . . . . . A . . . A . .
[1]3hwe.c rks,rks59 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Fe
[1]3hwf.a tc240 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Fe
[1]3hwg.a qed40 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Fe
[1]3i0a.a 2ds,3et60 . . . . . . . . . . . . . . . . . . . . . . . . . A . . Fe
[1]3i0a.b dbh11 . . . . - . . . . . . . . . . . . . . . . . . . . A . . Fe
[1]3i0a.c mcj49 . . . . . . . . . . . . . . . . . . . . . . . . . A . . Fe
[1]3k3l.a dbh,dbh,dbs,na40 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]3k3l.c mck,na40 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]3pec.a none . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]3pec.c zyg52 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Fe
[1]3ped.b zyf54 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Fe
[1]3t1d.a td123 . . . . . . . . . . . . A A . . . . F . . . . . . . . .
[1]3t1d.b dbh,dbs28 . . . . . . . . . . . . A A . . . . F . . . . . . . . .
[1]3t1d.c dbs17 . . . . . . . . . . . . A A . . . . F . . . . . . . . .
[1]3tf6.a dbh10 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Eu
[1]3tzs.c phu10 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]3u03.a 48821 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Fe
[1]3u0d.a dbh,dbh,dbh33 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Fe
[1]4k19.c 1od45 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Fe
[1]4zfx.a eb4,th16 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]4zhc.a tc2,th28 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]4zhd.c 4oz,4pu21 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]4zhf.c 4ol,zcm55 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]4zhg.c 4ol,am55 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]4zhh.b 4ol54 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Sm
[1]5jr8.a none . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]5khp.a 7k911 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Zr
[1]5kic.c 4ol,cf55 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]5kid.c 7k9,th13 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[2]3dsz.b liz,yt350 Q R . - . T Q . A R . . L M . . . . . . . . . . . S . L
[2]3dtq.b none Q R . A . T Q . A R . . A M . . . . . . . . . . . S . L
[3]5mhh.a none . * . . . F . . . . . . . . . . . . . . . W . . . N . .

Legend

B backbone contact  S side chain contact  F BB + SCh
.
 no contact C covalent bond
X mutation to X * complex cases - deletion
M contact with cofactors/metals (if any)

Site contact map

[download in TSV format]
   
PDB.ch
A1 Me
S
2
3
T
2
4
V
5
3
L
5
6
A
6
0
I
6
1
L
6
2
Q
6
9
Y
7
2
T
7
4
V
8
6
S
8
8
L
9
0
F
9
1
R
9
2
D
9
7
Y
9
8
W
9
9
R
1
0
1
F
1
0
3
L
1
1
4
Y
1
2
0
L
1
2
3
Y
1
2
6
F
1
4
3
K
1
4
4
K
1
4
5
S
1
4
7
R
1
5
0
Y
1
5
2
F
1
5
3
K
1
5
4
T
1
5
6
Y
1
5
8
[1]1l6m.a - . . . . . . . * . . . . . . . . * * . . . . . . . * . . . . . . . Fe
[1]1l6m.c - - . . . . . . * . . . . . . . . * * . . . . . . . * . . . . . . . Fe
[1]1qqs.a - . . . . . . . * . . . . . . . . A * . . . . . . . * . . . . * . .
[1]1x71.a . . . . . . . . * . . . . . . . . . * . . . . . . . * . . . . . . . Fe
[1]1x71.c - . . . . . . . * . . . . . . . . . * . . . . . . . * . . . . . . . Fe
[1]1x89.a - . . . . . . . * . . . . . . . . * . . . . . . . . * . . . . . . . Fe
[1]1x8u.a . . . . . . . . * . . . . . . . . * * . . . . . . . * . . . . . . . Fe
[1]3by0.a - - . . . . . . * . . . . . . . . A A . . . . . . . * . . . . . . . Fe
[1]3by0.b - - . . . . . . * . . . . . - . . A A . . . . . . . * . . . . * . . Fe
[1]3by0.c - . . . . . . . * . . . * . . . . A A . . . . . . . * . . . . . . . Fe
[1]3cbc.c . . . . . . . . * . . . . . . . . . * . . . . F . . * . . . . . . .
[1]3cmp.a - - . . . . . . * . . . . . . . . * * . . . . . . . A . . . . . . . Fe
[1]3cmp.b - - . . . . . . . . . . . . . . . . * . . . . . . . A . . . . * . . Fe
[1]3cmp.c - . . . . . . . * . . . * . * . . * * . . . . . . . A . . . . . . . Fe
[1]3fw4.c - - . . . . . . * . . . . . . . . * * . . . . . . . * . . . . . . . Fe
[1]3fw5.c - . . . . . . . * . . . . . . . . * * . . . . . . . * . . . . . . . Fe
[1]3hwd.a . . . . . . . . * . . . . . . . . . . . . . . . . . A . . . . A . .
[1]3hwe.c - . . . . . . . * . . . * . . . . * * . . . . . . . * . . . . . . . Fe
[1]3hwf.a - - . . . . . . * . . . * . . . . * * . . . . . . . * . . . . . . . Fe
[1]3hwg.a - . . . . . . . * . . . . . . . . * * . . . . . . . * . . . . . . . Fe
[1]3i0a.a - - . . . . . . * . . . . . * . . * * . . . . . . . * . . . . A . . Fe
[1]3i0a.b - - . . . . . - * . . . . . . . . . . . . . . . . . * . . . . A . . Fe
[1]3i0a.c . . . . . . . . * . . . . . * . . * * . . . . . . . * . . . . A . . Fe
[1]3k3l.a - . . . . . . . * . . . . . . . . * * . . . . . . . * . . . . . . .
[1]3k3l.c . . . . . . . . * . . . . . . . . * * . . . . . . . * . . . . * . .
[1]3pec.a . . . . . . . . * . . . . . . . . * * . . . . . . . * . . . . . . .
[1]3pec.c - . . . . . . . * . . . . . . . . * * . . . . . . . * . . . . . . . Fe
[1]3ped.b - - . . . . . . * . . . . . . . . * . . . . . . . . * . . . . * . . Fe
[1]3t1d.a . . . . . . . . * . . . * . . . . A A . . . . F . . * . . . . . . .
[1]3t1d.b - - . . . . . . * . . . . . . . . A A . . . . F . . * . . . . * . .
[1]3t1d.c - . . . . . . . * . . . . . . . . A A . . . . F . . * . . . . . . .
[1]3tf6.a . . . . . . . . * . . . . . . . . * * . . . . . . . * . . . . . . . Eu
[1]3tzs.c - - . . . . . . * . . . . . . . . * * . . . . . . . * . . . . . . .
[1]3u03.a - - . . . . . . * . . . . . . . . * * . . . . . . . * . . . . . . . Fe
[1]3u0d.a - . . . . . . . * . . . . . * . . * * . . . . . . . * . . . . * . . Fe
[1]4k19.c . . . . . . . . * . . . * . . . . * * . . . . . . . * . . . . * . . Fe
[1]4zfx.a - . . . . . . . * . . . . . . . . * * . . . . * . . * . . . . . . .
[1]4zhc.a - . . . . . . . * . . . . . . . . * * . . . . * . . * . . . . . . .
[1]4zhd.c . . . . . . . . * . . . . . . . . * * . . . . . . . * . . . . * . .
[1]4zhf.c . . . . . . . . * . . . . . . . . * * . . . . . . . * . . . . . . .
[1]4zhg.c . . . . . . . . * . . . . . . . . * * . . . . * . . * . . . . . . .
[1]4zhh.b . . . . . . . . * . . . . . . . . * * . . . . * . . * . . . . . . . Sm
[1]5jr8.a - - . . . . . . * . . . * . . . . * * . . . . . . . * . Q . . . . .
[1]5khp.a - - . . . . . . * . . . . . . . . * * . . . . . . . * . . . . * . . Zr
[1]5kic.c . . . . . . . . * . . . . . . . . * * . . . . . . . * . . . . . . .
[1]5kid.c - . . . . . . . * . . . . . . . . . * . . . . . . . * . . . . . . .
[2]3dsz.b - - Q R . - . . T Q . A R . . . . L M . . . . . . . * . . . . S . L
[2]3dtq.b . . Q R . A - . T Q . A R . . . . A M . . . . . . . . . . . . S . L
[3]5mhh.a - - . 7n8 . . . . F . . . . . . . . * * . . . . . . . W . . . . N . .

Legend

B backbone contact  S side chain contact  F BB + SCh
.
 no contact C covalent bond
X X X X X  clash
X mutation to X * complex cases - deletion
M contact with cofactors/metals (if any)

Pocket-ligand steric compatibility

Ligands (x) vs pockets (y) colored by number of steric clashes

zoom: [−] [+]; [view as image]; [download as text]

pocketligand
≥10
9
8
7
6
5
4
3
2
1
0
1l6m.a:dbh,dbs
1l6m.c:dbh,dbs
1qqs.a:dka
1x71.a:db1
1x71.c:db1
1x89.a:cm1
1x8u.a:cm2
3by0.a:dbh,dbs
3by0.b:dbh
3by0.c:dbh,dbs
3cbc.c:dbs,na
3cmp.a:eb4,na
3cmp.b:dbh,na
3cmp.c:eb4,na
3fw4.c:caq
3fw5.c:mct
3hwd.a is apo
3hwe.c:rks
3hwf.a:tc2
3hwg.a:qed
3i0a.a:2ds,3et
3i0a.b:dbh
3i0a.c:mcj
3k3l.a:dbh,dbs,na
3k3l.c:mck,na
3pec.a is apo
3pec.c:zyg
3ped.b:zyf
3t1d.a:td1
3t1d.b:dbh,dbs
3t1d.c:dbs
3tf6.a:dbh
3tzs.c:phu
3u03.a:488
3u0d.a:dbh
4k19.c:1od
4zfx.a:eb4,th
4zhc.a:tc2,th
4zhd.c:4oz,4pu
4zhf.c:4ol,zcm
4zhg.c:4ol,am
4zhh.b:4ol
5jr8.a is apo
5khp.a:7k9
5kic.c:4ol,cf
5kid.c:7k9,th
3dsz.b:liz,yt3
3dtq.b is apo
5mhh.a is apo
[1] 1l6m.a
0.4
0.2 0.2 0 0 5.9 5.8 0.8 0 4.5 0 1.1 0 0.3 0 0 - 0 0 0 0.7 0.1 0.2 0.1 0 - 3.9 5.3 0.1 1.8 0.7 0 0 0.4 0.4 0.1 0 0.2 0 2.8 2.6 2.7 - 0 1.8 0 6.6 - -
[1] 1l6m.c 0.7
0.1
0.3 0 0 5.1 5.0 1.3 0 5.0 0.1 0.9 0.1 0.3 0 0 - 0.3 0.1 0.3 0.7 0 0.4 0.1 0 - 4.1 4.9 0.1 1.9 0.8 0 0 0.2 0.6 0.3 0 0.3 0 1.0 1.3 1.0 - 0 0.6 0 6.9 - -
[1] 1qqs.a 0.4 0
0.1
0 0 2.5 2.9 0.5 0 2.9 0.1 1.1 0.3 0.6 0 0 - 0.2 0.1 0.3 0.8 0 0.1 0 0.1 - 2.4 2.6 0.1 1.6 0.4 0 0 0.1 0.7 0.1 0 0.3 0.1 0.6 0.6 0.5 - 0 0.3 0 6.5 - -
[1] 1x71.a 0.6 0.5 0.4
0.1
0 2.8 3.0 0.5 0 3.4 0.1 0.7 0.1 0.4 0 0 - 0.1 0.2 0.1 0.8 0 0.1 0 0 - 3.2 3.0 0 2.6 1.4 0 0 0.1 0.9 0.3 0 0 0 0.9 0.9 0.8 - 0 0.3 0 6.4 - -
[1] 1x71.c 0.6 0.4 0.4 0.2
0
2.1 2.3 1.4 0 3.3 0 1.0 0.1 0.5 0 0 - 0.2 0.2 0.2 0.8 0 0.2 0 0.1 - 2.3 2.0 0 3.0 1.7 0 0 0.2 1.4 0.2 0 0.2 0 0.9 0.9 0.9 - 0 0.4 0 5.2 - -
[1] 1x89.a 0.3 0 0.2 0 0
0
0.1 1.2 0 0.9 0 0.7 0.1 0.3 0 0 - 1.9 0.5 0.2 2.2 0 1.4 0 0 - 0.5 0.1 0 0.3 0.2 0 0 0 0.4 2.7 0 0.1 0 3.2 2.6 2.3 - 0 2.0 0 7.1 - -
[1] 1x8u.a 0.7 0 0.2 0 0 0.1
0
1.2 0 0.7 0 0.7 0.1 0.5 0 0 - 1.6 0.4 0.1 1.9 0 1.3 0 0 - 0.1 0.1 0 0.4 0.4 0 0 0 0.5 2.8 0 0.1 0 3.1 2.5 2.5 - 0 1.7 0 7.0 - -
[1] 3by0.a 0.4 0.1 0.4 0 0 0.2 0.2
0
0 0 0.3 1.2 0.1 0.4 0 0 - 0.1 0.1 0.1 0.7 0 0.2 0.1 0.1 - 0.7 0.2 0.2 0.2 0.6 0 0 0.3 0.3 0.2 0 0.1 0 0.9 0.9 0.7 - 0 0.4 0 3.7 - -
[1] 3by0.b 0.4 0.2 0.4 0.1 0.1 0.3 0.2 0.1
0
0.1 0.3 1.3 0.3 0.6 0 0 - 0.3 0.2 0.1 0.8 0 0.2 0.2 0.2 - 0.8 0.2 0.2 0.2 0.4 0 0 0.3 0.3 0.2 0 0.3 0.1 1.0 1.1 0.9 - 0 0.6 0 3.0 - -
[1] 3by0.c 0.3 0.1 0.3 0 0 0.3 0.7 0 0
0
0.2 1.2 0.1 0.5 0 0 - 0.1 0.1 0.1 0.7 0 0.2 0 0.1 - 1.0 0.8 0.1 0.2 0.6 0 0 0.3 0.3 0.2 0 0.1 0 1.0 1.0 1.1 - 0 0.5 0 4.2 - -
[1] 3cbc.c 0.1 0 0.2 0 0 2.4 2.3 0.3 0 2.8
0
1.1 0.3 0.5 0 0 - 0.1 0.1 0.3 0.6 0 0.1 0 0 - 2.3 1.7 0 0.9 0.5 0 0 0 0.4 0 0 0.1 0 0.7 0.5 0.7 - 0 0.2 0 5.5 - -
[1] 3cmp.a 0.3 0.2 0.4 0.1 0 5.9 5.5 1.0 0 4.2 0.2
0
0 0 0 0 - 0.3 0 0 0.7 0 0.1 0.2 0.1 - 4.0 5.3 0 1.9 0.5 0 0 0.1 0.4 0.2 0 0.1 0.1 1.2 1.2 1.3 - 0 0.7 0 7.0 - -
[1] 3cmp.b 0.5 0 0 0 0 0.4 0.5 1.0 0 0.6 0.3 0.2
0
0.1 0 0 - 0.2 0.1 0 1.1 0 0.1 0 0.2 - 0.6 0.4 0.1 0.7 0.4 0 0 0.1 0.3 0.1 0 0.3 0 0.4 0.4 0.3 - 0 0.1 0 0.9 - -
[1] 3cmp.c 0.5 0.1 0.3 0.1 0 6.8 6.6 1.1 0 4.1 0 0 0
0
0 0 - 0.2 0 0 1.5 0 0.2 0.2 0 - 5.3 5.9 0 1.8 0.3 0 0 0.1 0.4 0.3 0 0.1 0 1.2 1.2 1.2 - 0 0.9 0 7.3 - -
[1] 3fw4.c 2.2 0.5 0.1 0.8 0 3.3 3.9 3.3 0 3.1 0 0.8 0.1 0.9
0
0 - 1.7 0.8 1.0 2.3 0 1.1 0.5 0 - 1.1 3.2 0 1.5 0.2 0 0 0 2.2 1.4 0 0.2 0 2.2 2.1 1.9 - 0 0.9 0 5.5 - -
[1] 3fw5.c 1.5 1.1 0.1 1.1 0 4.8 4.5 2.0 0 4.7 0 1.4 0.1 1.0 0
0
- 1.5 1.0 1.1 1.9 0 1.5 1.2 0.1 - 2.8 4.0 0 1.1 0.2 0 0 0 1.7 1.2 0 0.1 0 1.8 1.9 1.6 - 0 1.1 0 8.2 - -
[1] 3hwd.a 0.2 0 0.2 0 0 0.1 0.1 0.3 0 0.1 0.3 0.2 0 0.1 0 0
-
0.2 0.1 0 0.3 0 0.1 0 0.2 - 0.6 0 0.1 0.1 0.4 0 0 0.2 0.2 0.2 0 0 0 0.3 0.3 0.1 - 0 0 0 2.8 - -
[1] 3hwe.c 0.3 0.1 0.3 0 0 5.6 4.7 0.6 0 3.9 0 0.9 0.1 0.5 0 0 -
0.1
0.2 0.1 0.6 0 0.1 0 0.1 - 3.1 5.0 0 1.8 0.4 0 0 0.1 0.3 0.1 0 0.1 0.1 2.6 2.4 2.5 - 0 1.7 0 6.3 - -
[1] 3hwf.a 0.2 0.1 0.5 0 0 5.3 5.2 0.2 0 3.4 0.3 1.2 0 0.4 0 0 - 0.2
0
0 0.7 0 0.2 0.1 0.3 - 3.3 5.4 0.4 1.5 0.8 0 0 0.5 0.2 0.3 0.1 0.2 0.2 3.3 3.2 3.0 - 0 2.2 0 6.8 - -
[1] 3hwg.a 0.3 0.2 0.6 0.1 0 6.1 5.9 0.3 0 4.1 0.3 1.2 0 0.4 0 0 - 0.6 0.1
0
0.4 0 0.2 0.2 0.3 - 4.0 5.9 0.1 2.3 1.2 0 0 0.5 0.5 0.5 0 0.2 0.1 3.5 3.7 3.4 - 0 3.0 0 7.2 - -
[1] 3i0a.a 0.2 0.1 0.4 0.2 0.1 5.7 6.1 0.3 0 3.3 0.3 1.1 0.2 0.6 0 0 - 0.5 0.1 0.2
0.1
0 0.1 0.1 0.2 - 3.7 6.2 0.2 1.5 0.4 0 0 0.3 0.3 0.1 0 0.1 0.1 4.0 4.0 3.9 - 0 3.1 0 7.1 - -
[1] 3i0a.b 0.4 0 0.4 0.1 0.1 0.4 0.4 0.3 0 0.5 0.4 1.2 0.5 0.6 0 0 - 0.1 0.1 0.1 0.1
0
0.1 0.2 0.2 - 0.5 0.3 0.2 0.2 0.3 0 0 0.4 0.3 0.1 0 0 0 0.6 0.6 0.4 - 0 0.2 0 3.1 - -
[1] 3i0a.c 0.4 0.1 0.2 0.2 0 6.0 6.0 0.2 0 3.3 0.3 1.0 0.1 0.7 0 0 - 0.3 0.1 0.1 0.6 0
0.1
0.1 0.1 - 3.8 6.0 0.1 1.3 0.4 0 0 0.3 0.2 0.2 0 0.1 0.1 3.7 4.0 3.7 - 0 3.2 0 6.4 - -
[1] 3k3l.a 0.4 0.3 0.3 0.1 0 5.0 5.4 0.3 0 3.3 0.2 1.2 0.3 0.7 0 0 - 0.1 0.2 0.3 0.7 0 0.1
0
0.2 - 3.7 5.2 0.1 1.7 0.5 0 0.1 0.3 0.4 0.4 0 0.2 0 2.6 2.2 2.2 - 0 1.9 0 6.7 - -
[1] 3k3l.c 0.6 0.2 0.3 0.1 0 5.3 5.2 1.2 0 4.7 0 0.9 0.1 0.5 0 0 - 0.3 0.1 0.1 0.8 0 0.2 0.1
0
- 3.6 5.3 0 1.7 0.4 0 0 0.1 0.5 0.3 0 0.1 0 1.1 1.1 0.9 - 0 0.4 0 7.0 - -
[1] 3pec.a 2.4 1.7 0.2 1.7 0 2.8 3.2 3.2 0 3.3 0.1 1.6 0.1 1.5 0 0 - 2.1 1.6 1.5 2.4 0 2.1 1.9 0.5
-
1.0 2.8 0 0.4 0.5 0 0 0.3 2.7 2.1 0 0.2 0 2.5 2.5 2.2 - 0 1.9 0 7.3 - -
[1] 3pec.c 0.9 0.1 0.4 0 0 0.3 0.4 1.9 0 1.3 0 0.7 0.1 0.5 0 0 - 1.9 0.9 0.3 2.5 0 1.9 0 0 -
0
0.5 0 0.6 0.5 0 0 0.1 0.8 2.7 0 0.1 0 3.9 3.9 4.0 - 0 2.5 0 6.5 - -
[1] 3ped.b 0.4 0.1 0.2 0 0 0.3 0.2 0.9 0 0.4 0 0.6 0.1 0.3 0 0 - 1.6 0.2 0.1 2.3 0 1.5 0 0 - 0.2
0.1
0 0.1 0.2 0 0 0 0.4 2.9 0 0.2 0 2.6 2.7 2.0 - 0 1.5 0 7.4 - -
[1] 3t1d.a 0.7 0 0.1 0 0 0 0 0.1 0 0.1 0 1.0 0.1 0.5 0 0 - 0.1 0.2 0.1 0.7 0 0.1 0 0 - 0.3 0.3
0
0 0.2 0 0 0.1 0.3 0.1 0 0.1 0 0.9 0.7 0.9 - 0 0.3 0 3.5 - -
[1] 3t1d.b 0.6 0 0.2 0 0 0.2 0.2 0.2 0 0.2 0 1.0 0.1 0.4 0 0 - 0 0.3 0.4 0.7 0 0.3 0 0 - 0.4 0.1 0
0.1
0.1 0 0 0 0.4 0.2 0 0.1 0 1.1 0.9 0.7 - 0 0.2 0 3.2 - -
[1] 3t1d.c 0.2 0 0.2 0 0 0.1 0.1 0 0 0.1 0 0.8 0.1 0.3 0 0 - 0 0.2 0.1 0.5 0 0 0 0 - 0.3 0.1 0 0
0.1
0 0 0 0.3 0.2 0 0.1 0 0.7 0.7 0.6 - 0 0.2 0 2.5 - -
[1] 3tf6.a 0.6 0.2 0.3 0.1 0 5.5 5.1 0.3 0 4.0 0.1 0.9 0.1 0.5 0 0 - 0.1 0.2 0.1 0.7 0 0.1 0 0 - 3.7 5.2 0 1.7 0.5
0
0 0 0.5 0.3 0 0.1 0.1 3.3 3.0 3.0 - 0 1.9 0 6.9 - -
[1] 3tzs.c 1.4 1.1 0.2 1.5 0 5.3 5.6 1.8 0 4.6 0 1.4 0.1 1.1 0 0 - 1.6 1.2 1.4 1.7 0 1.7 1.4 0.2 - 3.4 4.8 0 0.9 0.3 0
0
0 1.7 1.4 0 0.1 0 1.6 1.7 1.6 - 0 1.0 0 7.9 - -
[1] 3u03.a 1.9 1.2 0.2 1.3 0 5.0 4.7 1.5 0 4.6 0 1.3 0.1 1.0 0 0 - 1.4 1.3 1.2 2.2 0 1.4 1.0 0.1 - 3.6 4.7 0 1.9 0.7 0 0
0
1.9 1.3 0 0.3 0 1.8 1.9 1.5 - 0 1.1 0 8.8 - -
[1] 3u0d.a 0.2 0.2 0.4 0.1 0.1 5.9 6.0 0.5 0 3.2 0.1 1.2 0.2 0.4 0 0 - 0.2 0.1 0.1 1.3 0 0.2 0.1 0.1 - 4.0 5.8 0.2 1.1 0.5 0 0 0.3
0.2
0.2 0 0.1 0 4.1 4.1 4.0 - 0 3.3 0 6.9 - -
[1] 4k19.c 0.4 0.2 0.4 0.1 0 6.2 5.4 0.3 0 4.0 0.1 0.9 0.1 0.3 0 0 - 0.3 0.1 0.1 0.4 0.1 0.1 0 0.2 - 3.7 5.7 0.1 1.5 0.5 0 0 0.3 0.2
0.2
0 0.2 0.1 3.8 3.8 3.4 - 0 2.7 0 6.8 - -
[1] 4zfx.a 0.9 0.5 0.5 0.4 0.1 2.1 2.6 1.4 0.1 3.4 0.5 1.6 0.2 0.6 0.1 0.1 - 1.9 0.7 0.4 2.3 0 2.1 0.1 0.6 - 3.3 2.7 0.5 3.4 1.6 0 0 0.5 1.5 3.3
0.1
0 0.2 4.2 4.1 3.8 - 0 3.4 0.1 9.4 - -
[1] 4zhc.a 0.8 0.2 0.3 0.1 0.1 2.6 3.1 0.8 0 3.4 0.5 1.0 0.2 0.6 0 0 - 1.3 0.5 0.2 1.9 0 1.0 0.1 0.3 - 3.2 2.1 0.1 1.4 1.1 0 0 0.4 1.0 2.4 0
0.1
0 3.5 3.1 3.2 - 0 2.4 0.1 9.3 - -
[1] 4zhd.c 0.3 0.2 0.3 0 0 2.3 2.7 0.4 0 2.4 0.2 0.9 0.1 0.5 0 0 - 1.0 0.4 0.1 0.8 0 1.1 0 0.1 - 3.1 2.5 0.1 1.2 0.8 0 0 0.2 0.6 2.2 0 0.2
0
2.7 2.7 2.9 - 0 1.8 0 10 - -
[1] 4zhf.c 1.3 0 0.5 0.2 0 4.8 4.6 1.8 0 4.7 0.3 1.5 0.7 1.5 0 0 - 0.4 0.3 1.0 0.9 0 0.4 0.2 0.3 - 3.8 4.4 0.1 2.0 1.4 0 0 0.1 1.1 0.7 0 0.1 0
0
0 0 - 0 0 0 6.9 - -
[1] 4zhg.c 1.1 0.1 0.3 0.1 0.1 4.8 4.3 1.8 0 4.5 0.3 1.5 0.7 1.3 0 0 - 0.6 0.2 1.1 0.8 0 0.3 0.1 0.5 - 4.0 4.0 0.1 1.7 1.3 0 0 0.2 1.1 0.7 0 0.1 0 0.1
0
0 - 0 0 0 6.8 - -
[1] 4zhh.b 1.4 0.1 0.5 0.3 0.1 4.9 4.5 1.8 0.1 4.6 0.5 2.4 0.8 1.6 0 0 - 0.9 0.5 1.1 1.3 0 0.9 0.2 0.7 - 4.3 4.5 0.5 2.0 1.6 0.1 0 0.3 1.5 1.1 0.1 0.2 0.1 0.1 0.1
0
- 0 0.1 0.1 6.2 - -
[1] 5jr8.a 1.2 0.2 0.5 0.1 0.1 2.0 2.1 2.4 0.1 3.1 0.3 1.4 0.2 0.7 0 0.2 - 0.5 0.6 0.9 0.9 0.1 0.5 0.1 0.5 - 3.0 1.8 0.1 2.9 2.7 0.1 0.1 0.3 1.4 1.1 0.2 0.6 0.2 1.4 1.3 1.1
-
0.1 0.6 0.1 6.2 - -
[1] 5khp.a 2.3 0.7 0.1 1.0 0.1 4.0 4.5 3.1 0 3.5 0 1.2 0.1 0.9 0 0 - 1.7 1.1 1.3 2.4 0.1 1.5 1.0 0 - 1.7 3.3 0.1 1.6 0.8 0 0 0.2 2.4 1.4 0 0.4 0 2.0 2.3 1.7 -
0
1.2 0 5.9 - -
[1] 5kic.c 1.1 0 0.2 0.1 0 4.8 4.9 1.5 0 4.7 0.2 1.0 0.3 0.7 0 0 - 0.4 0.1 0.7 1.0 0 0.4 0.1 0.2 - 4.3 4.4 0 1.7 1.5 0 0 0 0.8 0.3 0 0.1 0 0.6 0.7 0.3 - 0
0
0 6.4 - -
[1] 5kid.c 0.4 0.2 0.2 0 0 2.6 2.5 0.5 0 2.9 0.1 0.9 0.1 0.5 0 0 - 0 0.1 0.1 0.4 0 0.1 0 0 - 2.9 2.2 0 1.4 0.8 0 0 0.1 0.5 0.1 0 0 0 1.0 0.8 0.7 - 0 0.4
0
6.7 - -
[2] 3dsz.b 1.7 0.1 0.6 0 0 1.6 2.6 2.1 0 1.7 0.4 1.2 0.5 0.9 0 0 - 1.2 0.5 0.6 0.9 0 0.7 0.4 0.5 - 2.1 2.0 0 1.0 1.0 0 0 0.8 1.5 1.0 0 0.7 0 1.2 1.2 1.0 - 0 0.8 0
0.2
- -
[2] 3dtq.b 1.6 0.1 0.9 0.2 0 2.7 2.9 2.0 0 1.9 1.9 2.4 1.0 2.4 0 0 - 2.9 0.6 0.7 2.9 0 0.5 1.9 3.0 - 4.1 3.1 0.8 2.8 0.9 0 0 0 1.5 0.6 0 2.0 0.8 2.0 2.0 2.0 - 0 1.5 0 4.9
-
-
[3] 5mhh.a 5.0 2.9 1.5 3.0 2.6 9.1 9.1 5.4 2.4 8.3 3.6 4.9 3.3 4.8 2.5 2.1 - 5.8 3.4 4.7 5.9 1.7 4.2 3.8 4.5 - 9.5 8.8 3.0 7.8 4.6 2.4 2.7 2.5 4.6 4.6 2.6 4.2 3.4 4.0 4.2 4.3 - 1.2 3.5 2.3 8.5 -
-
[Pocket-ligand steric clashes matrix]

Pocket clash dissimilarity (3 clusters)

Pockets (x) vs pockets (y) colored by ligand clash profile difference

zoom: [−] [+]; [view as image]; [download as text]

pocketpocket
≥1.
.9
.8
.7
.6
.5
.4
.3
.2
.1
.0
1l6m.a
1l6m.c
1qqs.a
1x71.a
1x71.c
1x89.a
1x8u.a
3by0.a
3by0.b
3by0.c
3cbc.c
3cmp.a
3cmp.b
3cmp.c
3fw4.c
3fw5.c
3hwd.a
3hwe.c
3hwf.a
3hwg.a
3i0a.a
3i0a.b
3i0a.c
3k3l.a
3k3l.c
3pec.a
3pec.c
3ped.b
3t1d.a
3t1d.b
3t1d.c
3tf6.a
3tzs.c
3u03.a
3u0d.a
4k19.c
4zfx.a
4zhc.a
4zhd.c
4zhf.c
4zhg.c
4zhh.b
5jr8.a
5khp.a
5kic.c
5kid.c
3dsz.b
3dtq.b
5mhh.a
[1] 1l6m.a
0
.07 .17 .15 .16 .15 .13 .22 .21 .25 .15 .07 .26 .12 .09 .07 .25 .07 .05 .05 .09 .24 .11 .06 .08 .12 .11 .16 .25 .24 .22 .06 .06 .08 .08 .07 .07 .09 .09 .08 .09 .10 .15 .10 .08 .15 .29 .41 .18
[1] 1l6m.c .07
0
.14 .15 .11 .14 .14 .18 .21 .19 .12 .08 .26 .11 .07 .05 .22 .05 .05 .07 .06 .22 .06 .05 .03 .10 .10 .15 .19 .22 .21 .04 .05 .08 .09 .07 .06 .05 .03 .06 .06 .10 .13 .07 .05 .10 .26 .38 .21
[1] 1qqs.a .17 .14
0
.08 .05 .25 .25 .13 .14 .13 .04 .17 .21 .21 .17 .16 .19 .15 .14 .16 .17 .16 .19 .14 .13 .23 .19 .25 .12 .14 .15 .13 .15 .17 .17 .15 .16 .14 .14 .17 .17 .21 .09 .17 .16 .05 .22 .32 .30
[1] 1x71.a .15 .15 .08
0
.05 .23 .23 .13 .15 .17 .07 .14 .18 .21 .17 .17 .15 .17 .14 .15 .18 .16 .20 .14 .15 .21 .21 .26 .13 .12 .13 .13 .15 .12 .19 .17 .14 .11 .17 .17 .18 .20 .11 .18 .15 .04 .22 .31 .26
[1] 1x71.c .16 .11 .05 .05
0
.23 .23 .12 .15 .14 .04 .16 .20 .20 .14 .13 .17 .14 .14 .14 .15 .16 .16 .12 .12 .21 .19 .25 .12 .14 .14 .11 .13 .12 .19 .17 .14 .11 .15 .17 .17 .21 .10 .17 .15 .03 .21 .31 .27
[1] 1x89.a .15 .14 .25 .23 .23
0
.03 .18 .19 .20 .22 .15 .25 .18 .13 .13 .19 .13 .15 .15 .16 .19 .15 .17 .13 .06 .09 .05 .19 .18 .17 .14 .13 .17 .15 .14 .17 .19 .15 .14 .15 .17 .26 .13 .13 .23 .29 .39 .25
[1] 1x8u.a .13 .14 .25 .23 .23 .03
0
.20 .19 .23 .22 .15 .24 .20 .12 .12 .21 .13 .15 .14 .18 .20 .17 .16 .13 .05 .08 .05 .19 .19 .17 .13 .12 .16 .16 .13 .17 .18 .16 .14 .15 .17 .25 .11 .13 .23 .28 .39 .25
[1] 3by0.a .22 .18 .13 .13 .12 .18 .20
0
.05 .04 .11 .23 .16 .27 .18 .21 .08 .22 .20 .21 .23 .07 .22 .18 .21 .17 .19 .19 .05 .05 .05 .19 .20 .22 .24 .23 .21 .20 .21 .19 .19 .23 .17 .19 .18 .10 .25 .31 .35
[1] 3by0.b .21 .21 .14 .15 .15 .19 .19 .05
0
.07 .13 .24 .13 .29 .19 .23 .09 .22 .21 .23 .26 .07 .25 .20 .22 .18 .20 .21 .07 .05 .05 .22 .22 .24 .23 .22 .22 .23 .23 .22 .23 .24 .20 .21 .21 .14 .24 .31 .36
[1] 3by0.c .25 .19 .13 .17 .14 .20 .23 .04 .07
0
.13 .25 .19 .25 .21 .23 .12 .22 .21 .24 .21 .10 .21 .21 .22 .20 .22 .22 .07 .08 .08 .23 .23 .25 .23 .23 .23 .22 .21 .21 .22 .26 .18 .23 .21 .13 .25 .32 .37
[1] 3cbc.c .15 .12 .04 .07 .04 .22 .22 .11 .13 .13
0
.16 .19 .21 .14 .13 .17 .15 .14 .15 .17 .15 .17 .12 .11 .20 .17 .23 .11 .13 .13 .11 .13 .15 .17 .15 .14 .13 .15 .14 .15 .19 .11 .15 .15 .04 .21 .32 .29
[1] 3cmp.a .07 .08 .17 .14 .16 .15 .15 .23 .24 .25 .16
0
.24 .07 .12 .09 .21 .08 .05 .08 .09 .25 .11 .07 .07 .13 .13 .16 .25 .24 .23 .06 .07 .10 .11 .08 .08 .10 .10 .09 .11 .13 .18 .11 .08 .15 .29 .41 .20
[1] 3cmp.b .26 .26 .21 .18 .20 .25 .24 .16 .13 .19 .19 .24
0
.29 .22 .25 .13 .28 .27 .29 .32 .17 .31 .27 .27 .23 .23 .25 .17 .15 .14 .27 .25 .27 .29 .28 .29 .28 .27 .28 .28 .29 .26 .23 .26 .19 .18 .25 .42
[1] 3cmp.c .12 .11 .21 .21 .20 .18 .20 .27 .29 .25 .21 .07 .29
0
.16 .13 .25 .11 .11 .15 .11 .29 .09 .13 .11 .18 .18 .21 .28 .29 .28 .13 .13 .15 .09 .11 .14 .14 .11 .14 .15 .17 .21 .16 .12 .20 .31 .43 .26
[1] 3fw4.c .09 .07 .17 .17 .14 .13 .12 .18 .19 .21 .14 .12 .22 .16
0
.04 .21 .10 .11 .10 .13 .19 .11 .07 .09 .10 .07 .13 .18 .19 .17 .07 .06 .06 .14 .13 .10 .09 .09 .09 .10 .13 .16 .04 .07 .14 .24 .37 .24
[1] 3fw5.c .07 .05 .16 .17 .13 .13 .12 .21 .23 .23 .13 .09 .25 .13 .04
0
.25 .07 .07 .08 .09 .23 .09 .06 .06 .11 .07 .13 .21 .23 .20 .05 .02 .06 .11 .09 .08 .09 .07 .08 .08 .12 .17 .05 .07 .14 .27 .40 .22
[1] 3hwd.a .25 .22 .19 .15 .17 .19 .21 .08 .09 .12 .17 .21 .13 .25 .21 .25
0
.23 .24 .27 .25 .09 .23 .23 .23 .19 .23 .21 .11 .10 .09 .24 .25 .25 .27 .26 .26 .25 .25 .23 .24 .25 .20 .22 .21 .15 .21 .27 .37
[1] 3hwe.c .07 .05 .15 .17 .14 .13 .13 .22 .22 .22 .15 .08 .28 .11 .10 .07 .23
0
.06 .09 .07 .25 .08 .08 .05 .12 .11 .15 .21 .22 .22 .07 .07 .11 .07 .03 .09 .10 .08 .09 .09 .10 .17 .11 .07 .15 .25 .37 .20
[1] 3hwf.a .05 .05 .14 .14 .14 .15 .15 .20 .21 .21 .14 .05 .27 .11 .11 .07 .24 .06
0
.05 .07 .23 .09 .05 .05 .13 .13 .17 .24 .22 .22 .05 .06 .10 .08 .06 .04 .07 .07 .06 .07 .09 .14 .11 .06 .13 .29 .40 .17
[1] 3hwg.a .05 .07 .16 .15 .14 .15 .14 .21 .23 .24 .15 .08 .29 .15 .10 .08 .27 .09 .05
0
.07 .23 .11 .04 .09 .10 .11 .16 .24 .25 .24 .05 .07 .08 .10 .08 .03 .06 .08 .08 .09 .12 .15 .10 .07 .13 .31 .44 .17
[1] 3i0a.a .09 .06 .17 .18 .15 .16 .18 .23 .26 .21 .17 .09 .32 .11 .13 .09 .25 .07 .07 .07
0
.24 .04 .08 .08 .14 .14 .18 .25 .27 .26 .07 .09 .11 .09 .09 .08 .09 .07 .10 .10 .14 .16 .13 .09 .14 .29 .41 .19
[1] 3i0a.b .24 .22 .16 .16 .16 .19 .20 .07 .07 .10 .15 .25 .17 .29 .19 .23 .09 .25 .23 .23 .24
0
.22 .20 .22 .17 .20 .20 .11 .10 .08 .23 .22 .24 .26 .26 .24 .24 .25 .21 .20 .23 .18 .21 .19 .15 .21 .29 .35
[1] 3i0a.c .11 .06 .19 .20 .16 .15 .17 .22 .25 .21 .17 .11 .31 .09 .11 .09 .23 .08 .09 .11 .04 .22
0
.10 .08 .13 .13 .17 .24 .25 .25 .09 .09 .13 .07 .11 .11 .11 .07 .09 .09 .13 .17 .11 .07 .16 .27 .39 .22
[1] 3k3l.a .06 .05 .14 .14 .12 .17 .16 .18 .20 .21 .12 .07 .27 .13 .07 .06 .23 .08 .05 .04 .08 .20 .10
0
.07 .11 .11 .17 .22 .23 .21 .04 .06 .06 .11 .09 .05 .06 .09 .08 .09 .13 .13 .08 .07 .12 .29 .41 .19
[1] 3k3l.c .08 .03 .13 .15 .12 .13 .13 .21 .22 .22 .11 .07 .27 .11 .09 .06 .23 .05 .05 .09 .08 .22 .08 .07
0
.11 .11 .14 .21 .21 .21 .04 .05 .09 .09 .06 .07 .07 .06 .07 .08 .11 .14 .08 .06 .12 .25 .38 .21
[1] 3pec.a .12 .10 .23 .21 .21 .06 .05 .17 .18 .20 .20 .13 .23 .18 .10 .11 .19 .12 .13 .10 .14 .17 .13 .11 .11
0
.06 .06 .18 .19 .18 .11 .10 .14 .15 .12 .12 .14 .12 .10 .11 .15 .21 .09 .09 .19 .29 .38 .24
[1] 3pec.c .11 .10 .19 .21 .19 .09 .08 .19 .20 .22 .17 .13 .23 .18 .07 .07 .23 .11 .13 .11 .14 .20 .13 .11 .11 .06
0
.09 .18 .20 .18 .09 .07 .11 .13 .13 .12 .14 .10 .11 .12 .15 .21 .06 .10 .19 .27 .39 .27
[1] 3ped.b .16 .15 .25 .26 .25 .05 .05 .19 .21 .22 .23 .16 .25 .21 .13 .13 .21 .15 .17 .16 .18 .20 .17 .17 .14 .06 .09
0
.21 .19 .19 .15 .12 .17 .19 .16 .18 .20 .16 .14 .15 .19 .27 .11 .14 .25 .33 .41 .27
[1] 3t1d.a .25 .19 .12 .13 .12 .19 .19 .05 .07 .07 .11 .25 .17 .28 .18 .21 .11 .21 .24 .24 .25 .11 .24 .22 .21 .18 .18 .21
0
.04 .05 .19 .21 .21 .25 .23 .23 .20 .21 .23 .23 .27 .17 .21 .21 .11 .22 .29 .37
[1] 3t1d.b .24 .22 .14 .12 .14 .18 .19 .05 .05 .08 .13 .24 .15 .29 .19 .23 .10 .22 .22 .25 .27 .10 .25 .23 .21 .19 .20 .19 .04
0
.03 .20 .21 .22 .25 .25 .23 .22 .23 .23 .23 .25 .20 .22 .20 .13 .24 .29 .35
[1] 3t1d.c .22 .21 .15 .13 .14 .17 .17 .05 .05 .08 .13 .23 .14 .28 .17 .20 .09 .22 .22 .24 .26 .08 .25 .21 .21 .18 .18 .19 .05 .03
0
.21 .20 .21 .25 .25 .25 .23 .24 .23 .23 .25 .20 .20 .20 .13 .22 .29 .36
[1] 3tf6.a .06 .04 .13 .13 .11 .14 .13 .19 .22 .23 .11 .06 .27 .13 .07 .05 .24 .07 .05 .05 .07 .23 .09 .04 .04 .11 .09 .15 .19 .20 .21
0
.04 .05 .10 .08 .05 .05 .06 .07 .08 .12 .13 .08 .05 .10 .27 .39 .19
[1] 3tzs.c .06 .05 .15 .15 .13 .13 .12 .20 .22 .23 .13 .07 .25 .13 .06 .02 .25 .07 .06 .07 .09 .22 .09 .06 .05 .10 .07 .12 .21 .21 .20 .04
0
.07 .09 .08 .07 .09 .07 .07 .07 .11 .17 .06 .05 .13 .28 .40 .21
[1] 3u03.a .08 .08 .17 .12 .12 .17 .16 .22 .24 .25 .15 .10 .27 .15 .06 .06 .25 .11 .10 .08 .11 .24 .13 .06 .09 .14 .11 .17 .21 .22 .21 .05 .07
0
.15 .13 .07 .05 .10 .12 .13 .17 .15 .09 .09 .13 .29 .39 .21
[1] 3u0d.a .08 .09 .17 .19 .19 .15 .16 .24 .23 .23 .17 .11 .29 .09 .14 .11 .27 .07 .08 .10 .09 .26 .07 .11 .09 .15 .13 .19 .25 .25 .25 .10 .09 .15
0
.07 .11 .12 .08 .10 .10 .11 .19 .13 .10 .17 .29 .42 .23
[1] 4k19.c .07 .07 .15 .17 .17 .14 .13 .23 .22 .23 .15 .08 .28 .11 .13 .09 .26 .03 .06 .08 .09 .26 .11 .09 .06 .12 .13 .16 .23 .25 .25 .08 .08 .13 .07
0
.09 .10 .09 .10 .10 .11 .16 .12 .09 .15 .27 .41 .19
[1] 4zfx.a .07 .06 .16 .14 .14 .17 .17 .21 .22 .23 .14 .08 .29 .14 .10 .08 .26 .09 .04 .03 .08 .24 .11 .05 .07 .12 .12 .18 .23 .23 .25 .05 .07 .07 .11 .09
0
.04 .08 .07 .07 .11 .13 .10 .07 .13 .32 .42 .17
[1] 4zhc.a .09 .05 .14 .11 .11 .19 .18 .20 .23 .22 .13 .10 .28 .14 .09 .09 .25 .10 .07 .06 .09 .24 .11 .06 .07 .14 .14 .20 .20 .22 .23 .05 .09 .05 .12 .10 .04
0
.07 .10 .10 .14 .11 .11 .08 .10 .29 .40 .20
[1] 4zhd.c .09 .03 .14 .17 .15 .15 .16 .21 .23 .21 .15 .10 .27 .11 .09 .07 .25 .08 .07 .08 .07 .25 .07 .09 .06 .12 .10 .16 .21 .23 .24 .06 .07 .10 .08 .09 .08 .07
0
.08 .09 .13 .14 .07 .07 .12 .29 .41 .23
[1] 4zhf.c .08 .06 .17 .17 .17 .14 .14 .19 .22 .21 .14 .09 .28 .14 .09 .08 .23 .09 .06 .08 .10 .21 .09 .08 .07 .10 .11 .14 .23 .23 .23 .07 .07 .12 .10 .10 .07 .10 .08
0
.02 .06 .16 .08 .03 .15 .28 .39 .20
[1] 4zhg.c .09 .06 .17 .18 .17 .15 .15 .19 .23 .22 .15 .11 .28 .15 .10 .08 .24 .09 .07 .09 .10 .20 .09 .09 .08 .11 .12 .15 .23 .23 .23 .08 .07 .13 .10 .10 .07 .10 .09 .02
0
.04 .15 .09 .04 .16 .27 .39 .20
[1] 4zhh.b .10 .10 .21 .20 .21 .17 .17 .23 .24 .26 .19 .13 .29 .17 .13 .12 .25 .10 .09 .12 .14 .23 .13 .13 .11 .15 .15 .19 .27 .25 .25 .12 .11 .17 .11 .11 .11 .14 .13 .06 .04
0
.19 .13 .08 .20 .28 .39 .19
[1] 5jr8.a .15 .13 .09 .11 .10 .26 .25 .17 .20 .18 .11 .18 .26 .21 .16 .17 .20 .17 .14 .15 .16 .18 .17 .13 .14 .21 .21 .27 .17 .20 .20 .13 .17 .15 .19 .16 .13 .11 .14 .16 .15 .19
0
.16 .14 .08 .22 .33 .28
[1] 5khp.a .10 .07 .17 .18 .17 .13 .11 .19 .21 .23 .15 .11 .23 .16 .04 .05 .22 .11 .11 .10 .13 .21 .11 .08 .08 .09 .06 .11 .21 .22 .20 .08 .06 .09 .13 .12 .10 .11 .07 .08 .09 .13 .16
0
.07 .15 .26 .39 .25
[1] 5kic.c .08 .05 .16 .15 .15 .13 .13 .18 .21 .21 .15 .08 .26 .12 .07 .07 .21 .07 .06 .07 .09 .19 .07 .07 .06 .09 .10 .14 .21 .20 .20 .05 .05 .09 .10 .09 .07 .08 .07 .03 .04 .08 .14 .07
0
.13 .26 .38 .21
[1] 5kid.c .15 .10 .05 .04 .03 .23 .23 .10 .14 .13 .04 .15 .19 .20 .14 .14 .15 .15 .13 .13 .14 .15 .16 .12 .12 .19 .19 .25 .11 .13 .13 .10 .13 .13 .17 .15 .13 .10 .12 .15 .16 .20 .08 .15 .13
0
.21 .31 .28
[2] 3dsz.b .29 .26 .22 .22 .21 .29 .28 .25 .24 .25 .21 .29 .18 .31 .24 .27 .21 .25 .29 .31 .29 .21 .27 .29 .25 .29 .27 .33 .22 .24 .22 .27 .28 .29 .29 .27 .32 .29 .29 .28 .27 .28 .22 .26 .26 .21
0
.19 .41
[2] 3dtq.b .41 .38 .32 .31 .31 .39 .39 .31 .31 .32 .32 .41 .25 .43 .37 .40 .27 .37 .40 .44 .41 .29 .39 .41 .38 .38 .39 .41 .29 .29 .29 .39 .40 .39 .42 .41 .42 .40 .41 .39 .39 .39 .33 .39 .38 .31 .19
0
.41
[3] 5mhh.a .18 .21 .30 .26 .27 .25 .25 .35 .36 .37 .29 .20 .42 .26 .24 .22 .37 .20 .17 .17 .19 .35 .22 .19 .21 .24 .27 .27 .37 .35 .36 .19 .21 .21 .23 .19 .17 .20 .23 .20 .20 .19 .28 .25 .21 .28 .41 .41
0
[Pocket clash dissimilarity matrix]

Site backbone RMSD (median 1.1 Å)

Pockets (x) vs pockets (y) colored by RMSD of site residue backbone atoms

zoom: [−] [+]; [view as image]; [download as text]

pocketpocket
≥10 Å
9 Å
8 Å
7 Å
6 Å
5 Å
4 Å
3 Å
2 Å
1 Å
0 Å
1l6m.a
1l6m.c
1qqs.a
1x71.a
1x71.c
1x89.a
1x8u.a
3by0.a
3by0.b
3by0.c
3cbc.c
3cmp.a
3cmp.b
3cmp.c
3fw4.c
3fw5.c
3hwd.a
3hwe.c
3hwf.a
3hwg.a
3i0a.a
3i0a.b
3i0a.c
3k3l.a
3k3l.c
3pec.a
3pec.c
3ped.b
3t1d.a
3t1d.b
3t1d.c
3tf6.a
3tzs.c
3u03.a
3u0d.a
4k19.c
4zfx.a
4zhc.a
4zhd.c
4zhf.c
4zhg.c
4zhh.b
5jr8.a
5khp.a
5kic.c
5kid.c
3dsz.b
3dtq.b
5mhh.a
[1] 1l6m.a
0
0.4 1.4 0.2 0.4 0.3 0.3 0.2 0.4 0.7 0.7 0.2 0.5 0.7 0.3 0.9 0.3 0.6 0.3 0.4 0.3 0.5 0.7 0.3 0.7 0.3 0.8 0.4 0.7 0.2 0.7 0.3 0.4 0.3 0.7 0.7 0.3 0.3 0.7 0.7 0.7 0.7 0.6 0.3 0.6 0.6 2.0 1.0 0.7
[1] 1l6m.c 0.4
0
0.6 0.4 0.4 0.4 0.4 0.4 0.4 0.4 0.4 0.4 0.6 0.4 0.4 0.4 0.4 0.4 0.4 0.4 0.4 0.7 0.4 0.4 0.4 0.4 0.3 0.5 0.3 0.4 0.6 0.4 0.4 0.4 0.4 0.4 0.4 0.4 0.4 0.5 0.6 0.5 0.6 0.4 0.4 0.3 2.0 0.9 0.7
[1] 1qqs.a 1.4 0.6
0
1.4 1.4 1.5 1.4 0.6 0.7 1.4 1.4 0.6 0.8 1.4 0.6 1.4 1.4 1.4 0.6 1.3 0.6 0.8 1.4 1.4 1.4 1.4 1.4 0.7 1.4 0.7 1.3 1.4 0.5 0.7 1.5 1.4 1.5 1.5 1.4 1.5 1.5 1.5 0.8 0.6 1.5 1.4 2.0 1.9 0.7
[1] 1x71.a 0.2 0.4 1.4
0
0.4 0.3 0.5 0.2 0.4 0.6 1.4 0.3 0.5 0.7 0.2 0.8 0.4 0.6 0.3 0.4 0.3 0.5 1.4 0.3 1.5 0.9 0.8 0.3 1.4 0.2 0.7 0.5 0.3 0.2 0.6 1.4 0.3 0.3 1.4 1.3 1.3 1.4 0.6 0.2 1.3 0.6 1.9 1.0 0.7
[1] 1x71.c 0.4 0.4 1.4 0.4
0
0.5 0.6 0.3 0.5 0.7 0.8 0.3 0.6 0.8 0.2 1.1 0.5 0.7 0.3 0.6 0.3 0.6 0.8 0.6 0.8 0.6 1.0 0.4 0.8 0.3 0.7 0.6 0.3 0.3 0.7 0.8 0.6 0.6 0.8 0.8 0.8 0.9 0.6 0.2 0.7 0.7 2.0 1.0 0.7
[1] 1x89.a 0.3 0.4 1.5 0.3 0.5
0
0.1 0.2 0.4 0.6 0.6 0.3 0.5 0.6 0.3 0.8 0.3 0.5 0.3 0.5 0.3 0.5 0.6 0.3 0.6 0.3 0.7 0.3 0.6 0.2 0.7 0.2 0.3 0.2 0.5 0.6 0.3 0.2 0.6 0.6 0.7 0.7 0.7 0.2 0.5 0.5 2.0 0.9 0.7
[1] 1x8u.a 0.3 0.4 1.4 0.5 0.6 0.1
0
0.3 0.4 0.6 1.1 0.3 0.5 0.6 0.3 0.8 0.3 0.5 0.4 0.5 0.3 0.5 1.2 0.3 1.2 1.1 0.7 0.3 1.2 0.2 0.7 0.3 0.4 0.3 0.5 1.1 0.3 0.3 1.2 1.0 1.1 1.1 0.7 0.3 1.1 0.5 2.0 1.0 0.7
[1] 3by0.a 0.2 0.4 0.6 0.2 0.3 0.2 0.3
0
0.4 0.2 0.3 0.3 0.5 0.3 0.3 0.2 0.3 0.3 0.3 0.3 0.2 0.5 0.3 0.2 0.3 0.2 0.3 0.4 0.2 0.2 0.5 0.2 0.3 0.3 0.3 0.4 0.2 0.2 0.3 0.3 0.4 0.4 0.6 0.2 0.3 0.2 2.0 0.9 0.7
[1] 3by0.b 0.4 0.4 0.7 0.4 0.5 0.4 0.4 0.4
0
0.5 0.5 0.4 0.5 0.5 0.5 0.5 0.4 0.4 0.5 0.5 0.5 0.5 0.5 0.4 0.4 0.4 0.5 0.4 0.5 0.3 0.5 0.4 0.5 0.5 0.5 0.5 0.4 0.4 0.5 0.4 0.5 0.5 0.7 0.5 0.4 0.4 2.0 0.8 0.8
[1] 3by0.c 0.7 0.4 1.4 0.6 0.7 0.6 0.6 0.2 0.5
0
0.2 0.3 0.6 0.3 0.3 0.6 0.6 0.3 0.3 0.7 0.3 0.6 0.2 0.6 0.2 0.6 0.5 0.4 0.2 0.3 0.8 0.5 0.3 0.4 0.4 0.3 0.5 0.5 0.2 0.4 0.5 0.4 0.6 0.3 0.4 0.2 2.0 1.2 0.7
[1] 3cbc.c 0.7 0.4 1.4 1.4 0.8 0.6 1.1 0.3 0.5 0.2
0
0.4 0.6 0.3 0.3 0.5 1.2 0.4 0.4 0.7 0.3 0.6 0.3 0.6 0.4 1.6 0.4 0.4 0.3 0.4 0.9 1.1 0.2 0.4 0.5 0.4 0.6 0.6 0.3 0.5 0.5 0.5 0.6 0.3 0.5 0.3 2.0 1.7 0.7
[1] 3cmp.a 0.2 0.4 0.6 0.3 0.3 0.3 0.3 0.3 0.4 0.3 0.4
0
0.5 0.3 0.3 0.3 0.2 0.3 0.2 0.3 0.2 0.6 0.3 0.2 0.3 0.3 0.3 0.4 0.3 0.3 0.5 0.2 0.4 0.3 0.4 0.4 0.3 0.3 0.4 0.4 0.5 0.4 0.6 0.3 0.3 0.3 2.0 0.9 0.7
[1] 3cmp.b 0.5 0.6 0.8 0.5 0.6 0.5 0.5 0.5 0.5 0.6 0.6 0.5
0
0.6 0.6 0.6 0.5 0.6 0.5 0.6 0.6 0.6 0.6 0.5 0.6 0.5 0.6 0.5 0.6 0.5 0.5 0.5 0.7 0.6 0.6 0.7 0.5 0.5 0.7 0.5 0.6 0.6 0.8 0.6 0.5 0.6 2.1 0.8 0.8
[1] 3cmp.c 0.7 0.4 1.4 0.7 0.8 0.6 0.6 0.3 0.5 0.3 0.3 0.3 0.6
0
0.3 0.5 0.6 0.3 0.3 0.7 0.3 0.6 0.3 0.6 0.3 0.6 0.4 0.4 0.3 0.3 0.9 0.5 0.3 0.4 0.5 0.3 0.5 0.6 0.3 0.5 0.6 0.5 0.6 0.3 0.4 0.3 2.0 1.2 0.7
[1] 3fw4.c 0.3 0.4 0.6 0.2 0.2 0.3 0.3 0.3 0.5 0.3 0.3 0.3 0.6 0.3
0
0.1 0.3 0.3 0.4 0.3 0.3 0.6 0.3 0.3 0.3 0.2 0.2 0.4 0.2 0.3 0.5 0.2 0.2 0.2 0.3 0.4 0.3 0.2 0.3 0.4 0.5 0.5 0.6 0.2 0.3 0.2 1.9 0.9 0.7
[1] 3fw5.c 0.9 0.4 1.4 0.8 1.1 0.8 0.8 0.2 0.5 0.6 0.5 0.3 0.6 0.5 0.1
0
0.8 0.6 0.4 0.8 0.3 0.6 0.5 0.7 0.5 0.7 0.2 0.4 0.4 0.3 1.0 0.7 0.2 0.3 0.8 0.5 0.7 0.7 0.5 0.7 0.7 0.7 0.6 0.2 0.7 0.6 1.9 1.4 0.7
[1] 3hwd.a 0.3 0.4 1.4 0.4 0.5 0.3 0.3 0.3 0.4 0.6 1.2 0.2 0.5 0.6 0.3 0.8
0
0.5 0.3 0.4 0.3 0.5 1.3 0.3 1.4 1.1 0.8 0.3 1.3 0.2 0.7 0.3 0.4 0.3 0.6 1.3 0.3 0.3 1.3 1.1 1.2 1.2 0.6 0.3 1.2 0.5 1.9 0.9 0.7
[1] 3hwe.c 0.6 0.4 1.4 0.6 0.7 0.5 0.5 0.3 0.4 0.3 0.4 0.3 0.6 0.3 0.3 0.6 0.5
0
0.4 0.6 0.3 0.6 0.4 0.5 0.4 0.5 0.5 0.4 0.4 0.3 0.8 0.4 0.3 0.4 0.4 0.4 0.5 0.4 0.4 0.5 0.6 0.5 0.6 0.3 0.4 0.3 1.9 1.1 0.7
[1] 3hwf.a 0.3 0.4 0.6 0.3 0.3 0.3 0.4 0.3 0.5 0.3 0.4 0.2 0.5 0.3 0.4 0.4 0.3 0.4
0
0.3 0.2 0.6 0.3 0.3 0.3 0.3 0.4 0.4 0.4 0.3 0.5 0.3 0.4 0.3 0.4 0.4 0.3 0.3 0.4 0.4 0.5 0.4 0.7 0.3 0.3 0.3 2.0 0.9 0.6
[1] 3hwg.a 0.4 0.4 1.3 0.4 0.6 0.5 0.5 0.3 0.5 0.7 0.7 0.3 0.6 0.7 0.3 0.8 0.4 0.6 0.3
0
0.2 0.6 0.7 0.4 0.7 0.3 0.8 0.4 0.7 0.3 0.7 0.3 0.4 0.3 0.7 0.7 0.4 0.4 0.7 0.7 0.8 0.8 0.7 0.3 0.7 0.6 1.9 1.1 0.6
[1] 3i0a.a 0.3 0.4 0.6 0.3 0.3 0.3 0.3 0.2 0.5 0.3 0.3 0.2 0.6 0.3 0.3 0.3 0.3 0.3 0.2 0.2
0
0.5 0.2 0.2 0.3 0.3 0.3 0.4 0.3 0.3 0.5 0.2 0.4 0.3 0.4 0.3 0.3 0.3 0.4 0.4 0.5 0.4 0.7 0.3 0.3 0.2 2.0 0.9 0.7
[1] 3i0a.b 0.5 0.7 0.8 0.5 0.6 0.5 0.5 0.5 0.5 0.6 0.6 0.6 0.6 0.6 0.6 0.6 0.5 0.6 0.6 0.6 0.5
0
0.6 0.5 0.5 0.5 0.6 0.5 0.6 0.5 0.6 0.5 0.6 0.6 0.6 0.6 0.6 0.6 0.6 0.6 0.7 0.7 0.8 0.6 0.6 0.6 2.1 0.9 0.8
[1] 3i0a.c 0.7 0.4 1.4 1.4 0.8 0.6 1.2 0.3 0.5 0.2 0.3 0.3 0.6 0.3 0.3 0.5 1.3 0.4 0.3 0.7 0.2 0.6
0
0.6 0.3 1.6 0.4 0.5 0.2 0.4 0.9 1.2 0.3 0.4 0.5 0.2 0.6 0.6 0.3 0.6 0.6 0.5 0.6 0.3 0.5 0.3 2.0 1.8 0.7
[1] 3k3l.a 0.3 0.4 1.4 0.3 0.6 0.3 0.3 0.2 0.4 0.6 0.6 0.2 0.5 0.6 0.3 0.7 0.3 0.5 0.3 0.4 0.2 0.5 0.6
0
0.6 0.3 0.7 0.4 0.6 0.2 0.7 0.2 0.4 0.2 0.6 0.6 0.2 0.2 0.6 0.6 0.6 0.6 0.7 0.3 0.5 0.5 2.0 1.0 0.7
[1] 3k3l.c 0.7 0.4 1.4 1.5 0.8 0.6 1.2 0.3 0.4 0.2 0.4 0.3 0.6 0.3 0.3 0.5 1.4 0.4 0.3 0.7 0.3 0.5 0.3 0.6
0
1.6 0.4 0.4 0.3 0.3 0.8 1.2 0.3 0.3 0.5 0.3 0.6 0.6 0.3 0.6 0.6 0.6 0.6 0.3 0.5 0.3 2.0 1.8 0.7
[1] 3pec.a 0.3 0.4 1.4 0.9 0.6 0.3 1.1 0.2 0.4 0.6 1.6 0.3 0.5 0.6 0.2 0.7 1.1 0.5 0.3 0.3 0.3 0.5 1.6 0.3 1.6
0
0.7 0.4 1.6 0.2 0.7 1.1 0.4 0.1 0.7 1.5 0.3 0.3 1.6 1.5 1.6 1.6 0.6 0.2 1.5 0.5 1.9 1.3 0.7
[1] 3pec.c 0.8 0.3 1.4 0.8 1.0 0.7 0.7 0.3 0.5 0.5 0.4 0.3 0.6 0.4 0.2 0.2 0.8 0.5 0.4 0.8 0.3 0.6 0.4 0.7 0.4 0.7
0
0.4 0.3 0.4 1.0 0.7 0.2 0.3 0.7 0.4 0.7 0.7 0.4 0.6 0.7 0.6 0.6 0.3 0.6 0.5 2.0 1.3 0.7
[1] 3ped.b 0.4 0.5 0.7 0.3 0.4 0.3 0.3 0.4 0.4 0.4 0.4 0.4 0.5 0.4 0.4 0.4 0.3 0.4 0.4 0.4 0.4 0.5 0.5 0.4 0.4 0.4 0.4
0
0.4 0.3 0.3 0.3 0.5 0.4 0.4 0.5 0.4 0.3 0.5 0.4 0.5 0.5 0.8 0.4 0.4 0.4 2.0 0.8 0.7
[1] 3t1d.a 0.7 0.3 1.4 1.4 0.8 0.6 1.2 0.2 0.5 0.2 0.3 0.3 0.6 0.3 0.2 0.4 1.3 0.4 0.4 0.7 0.3 0.6 0.2 0.6 0.3 1.6 0.3 0.4
0
0.3 0.9 1.2 0.2 0.3 0.5 0.3 0.5 0.5 0.2 0.5 0.6 0.5 0.6 0.2 0.5 0.3 2.0 1.8 0.7
[1] 3t1d.b 0.2 0.4 0.7 0.2 0.3 0.2 0.2 0.2 0.3 0.3 0.4 0.3 0.5 0.3 0.3 0.3 0.2 0.3 0.3 0.3 0.3 0.5 0.4 0.2 0.3 0.2 0.4 0.3 0.3
0
0.3 0.2 0.4 0.2 0.4 0.4 0.2 0.2 0.4 0.3 0.4 0.4 0.7 0.3 0.2 0.2 2.0 0.8 0.7
[1] 3t1d.c 0.7 0.6 1.3 0.7 0.7 0.7 0.7 0.5 0.5 0.8 0.9 0.5 0.5 0.9 0.5 1.0 0.7 0.8 0.5 0.7 0.5 0.6 0.9 0.7 0.8 0.7 1.0 0.3 0.9 0.3
0
0.7 0.6 0.4 0.8 0.9 0.7 0.7 0.9 0.8 0.8 0.8 0.8 0.5 0.7 0.8 2.0 1.0 0.7
[1] 3tf6.a 0.3 0.4 1.4 0.5 0.6 0.2 0.3 0.2 0.4 0.5 1.1 0.2 0.5 0.5 0.2 0.7 0.3 0.4 0.3 0.3 0.2 0.5 1.2 0.2 1.2 1.1 0.7 0.3 1.2 0.2 0.7
0
0.3 0.2 0.6 1.1 0.2 0.1 1.2 1.0 1.1 1.1 0.6 0.2 1.1 0.4 2.0 1.0 0.7
[1] 3tzs.c 0.4 0.4 0.5 0.3 0.3 0.3 0.4 0.3 0.5 0.3 0.2 0.4 0.7 0.3 0.2 0.2 0.4 0.3 0.4 0.4 0.4 0.6 0.3 0.4 0.3 0.4 0.2 0.5 0.2 0.4 0.6 0.3
0
0.4 0.3 0.3 0.4 0.4 0.3 0.5 0.6 0.5 0.6 0.3 0.4 0.3 2.0 1.0 0.6
[1] 3u03.a 0.3 0.4 0.7 0.2 0.3 0.2 0.3 0.3 0.5 0.4 0.4 0.3 0.6 0.4 0.2 0.3 0.3 0.4 0.3 0.3 0.3 0.6 0.4 0.2 0.3 0.1 0.3 0.4 0.3 0.2 0.4 0.2 0.4
0
0.4 0.4 0.3 0.2 0.4 0.4 0.5 0.4 0.7 0.2 0.3 0.2 1.9 0.9 0.7
[1] 3u0d.a 0.7 0.4 1.5 0.6 0.7 0.5 0.5 0.3 0.5 0.4 0.5 0.4 0.6 0.5 0.3 0.8 0.6 0.4 0.4 0.7 0.4 0.6 0.5 0.6 0.5 0.7 0.7 0.4 0.5 0.4 0.8 0.6 0.3 0.4
0
0.5 0.6 0.6 0.5 0.5 0.6 0.6 0.7 0.4 0.4 0.4 1.9 1.1 0.7
[1] 4k19.c 0.7 0.4 1.4 1.4 0.8 0.6 1.1 0.4 0.5 0.3 0.4 0.4 0.7 0.3 0.4 0.5 1.3 0.4 0.4 0.7 0.3 0.6 0.2 0.6 0.3 1.5 0.4 0.5 0.3 0.4 0.9 1.1 0.3 0.4 0.5
0
0.6 0.6 0.3 0.6 0.7 0.6 0.7 0.4 0.5 0.3 2.0 1.8 0.6
[1] 4zfx.a 0.3 0.4 1.5 0.3 0.6 0.3 0.3 0.2 0.4 0.5 0.6 0.3 0.5 0.5 0.3 0.7 0.3 0.5 0.3 0.4 0.3 0.6 0.6 0.2 0.6 0.3 0.7 0.4 0.5 0.2 0.7 0.2 0.4 0.3 0.6 0.6
0
0.2 0.6 0.5 0.6 0.6 0.6 0.3 0.5 0.4 2.0 1.0 0.7
[1] 4zhc.a 0.3 0.4 1.5 0.3 0.6 0.2 0.3 0.2 0.4 0.5 0.6 0.3 0.5 0.6 0.2 0.7 0.3 0.4 0.3 0.4 0.3 0.6 0.6 0.2 0.6 0.3 0.7 0.3 0.5 0.2 0.7 0.1 0.4 0.2 0.6 0.6 0.2
0
0.6 0.5 0.6 0.6 0.6 0.2 0.5 0.4 1.9 0.9 0.7
[1] 4zhd.c 0.7 0.4 1.4 1.4 0.8 0.6 1.2 0.3 0.5 0.2 0.3 0.4 0.7 0.3 0.3 0.5 1.3 0.4 0.4 0.7 0.4 0.6 0.3 0.6 0.3 1.6 0.4 0.5 0.2 0.4 0.9 1.2 0.3 0.4 0.5 0.3 0.6 0.6
0
0.5 0.6 0.5 0.5 0.3 0.5 0.3 2.0 1.8 0.7
[1] 4zhf.c 0.7 0.5 1.5 1.3 0.8 0.6 1.0 0.3 0.4 0.4 0.5 0.4 0.5 0.5 0.4 0.7 1.1 0.5 0.4 0.7 0.4 0.6 0.6 0.6 0.6 1.5 0.6 0.4 0.5 0.3 0.8 1.0 0.5 0.4 0.5 0.6 0.5 0.5 0.5
0
0.2 0.2 0.7 0.4 0.2 0.3 2.0 1.5 0.8
[1] 4zhg.c 0.7 0.6 1.5 1.3 0.8 0.7 1.1 0.4 0.5 0.5 0.5 0.5 0.6 0.6 0.5 0.7 1.2 0.6 0.5 0.8 0.5 0.7 0.6 0.6 0.6 1.6 0.7 0.5 0.6 0.4 0.8 1.1 0.6 0.5 0.6 0.7 0.6 0.6 0.6 0.2
0
0.2 0.6 0.5 0.3 0.5 2.1 1.6 0.8
[1] 4zhh.b 0.7 0.5 1.5 1.4 0.9 0.7 1.1 0.4 0.5 0.4 0.5 0.4 0.6 0.5 0.5 0.7 1.2 0.5 0.4 0.8 0.4 0.7 0.5 0.6 0.6 1.6 0.6 0.5 0.5 0.4 0.8 1.1 0.5 0.4 0.6 0.6 0.6 0.6 0.5 0.2 0.2
0
0.6 0.4 0.3 0.4 2.1 1.7 0.8
[1] 5jr8.a 0.6 0.6 0.8 0.6 0.6 0.7 0.7 0.6 0.7 0.6 0.6 0.6 0.8 0.6 0.6 0.6 0.6 0.6 0.7 0.7 0.7 0.8 0.6 0.7 0.6 0.6 0.6 0.8 0.6 0.7 0.8 0.6 0.6 0.7 0.7 0.7 0.6 0.6 0.5 0.7 0.6 0.6
0
0.6 0.6 0.6 2.2 1.1 1.1
[1] 5khp.a 0.3 0.4 0.6 0.2 0.2 0.2 0.3 0.2 0.5 0.3 0.3 0.3 0.6 0.3 0.2 0.2 0.3 0.3 0.3 0.3 0.3 0.6 0.3 0.3 0.3 0.2 0.3 0.4 0.2 0.3 0.5 0.2 0.3 0.2 0.4 0.4 0.3 0.2 0.3 0.4 0.5 0.4 0.6
0
0.3 0.2 2.0 0.9 0.7
[1] 5kic.c 0.6 0.4 1.5 1.3 0.7 0.5 1.1 0.3 0.4 0.4 0.5 0.3 0.5 0.4 0.3 0.7 1.2 0.4 0.3 0.7 0.3 0.6 0.5 0.5 0.5 1.5 0.6 0.4 0.5 0.2 0.7 1.1 0.4 0.3 0.4 0.5 0.5 0.5 0.5 0.2 0.3 0.3 0.6 0.3
0
0.3 2.0 1.6 0.8
[1] 5kid.c 0.6 0.3 1.4 0.6 0.7 0.5 0.5 0.2 0.4 0.2 0.3 0.3 0.6 0.3 0.2 0.6 0.5 0.3 0.3 0.6 0.2 0.6 0.3 0.5 0.3 0.5 0.5 0.4 0.3 0.2 0.8 0.4 0.3 0.2 0.4 0.3 0.4 0.4 0.3 0.3 0.5 0.4 0.6 0.2 0.3
0
1.9 1.1 0.7
[2] 3dsz.b 2.0 2.0 2.0 1.9 2.0 2.0 2.0 2.0 2.0 2.0 2.0 2.0 2.1 2.0 1.9 1.9 1.9 1.9 2.0 1.9 2.0 2.1 2.0 2.0 2.0 1.9 2.0 2.0 2.0 2.0 2.0 2.0 2.0 1.9 1.9 2.0 2.0 1.9 2.0 2.0 2.1 2.1 2.2 2.0 2.0 1.9
0
0.7 2.1
[2] 3dtq.b 1.0 0.9 1.9 1.0 1.0 0.9 1.0 0.9 0.8 1.2 1.7 0.9 0.8 1.2 0.9 1.4 0.9 1.1 0.9 1.1 0.9 0.9 1.8 1.0 1.8 1.3 1.3 0.8 1.8 0.8 1.0 1.0 1.0 0.9 1.1 1.8 1.0 0.9 1.8 1.5 1.6 1.7 1.1 0.9 1.6 1.1 0.7
0
1.1
[3] 5mhh.a 0.7 0.7 0.7 0.7 0.7 0.7 0.7 0.7 0.8 0.7 0.7 0.7 0.8 0.7 0.7 0.7 0.7 0.7 0.6 0.6 0.7 0.8 0.7 0.7 0.7 0.7 0.7 0.7 0.7 0.7 0.7 0.7 0.6 0.7 0.7 0.6 0.7 0.7 0.7 0.8 0.8 0.8 1.1 0.7 0.8 0.7 2.1 1.1
0
[Binding site backbone RMSD matrix]

Site full-atom RMSD (median 0.5 Å)

Pockets (x) vs pockets (y) colored by RMSD of all site residue atoms

zoom: [−] [+]; [view as image]; [download as text]

pocketpocket
≥10 Å
9 Å
8 Å
7 Å
6 Å
5 Å
4 Å
3 Å
2 Å
1 Å
0 Å
1l6m.a
1l6m.c
1qqs.a
1x71.a
1x71.c
1x89.a
1x8u.a
3by0.a
3by0.b
3by0.c
3cbc.c
3cmp.a
3cmp.b
3cmp.c
3fw4.c
3fw5.c
3hwd.a
3hwe.c
3hwf.a
3hwg.a
3i0a.a
3i0a.b
3i0a.c
3k3l.a
3k3l.c
3pec.a
3pec.c
3ped.b
3t1d.a
3t1d.b
3t1d.c
3tf6.a
3tzs.c
3u03.a
3u0d.a
4k19.c
4zfx.a
4zhc.a
4zhd.c
4zhf.c
4zhg.c
4zhh.b
5jr8.a
5khp.a
5kic.c
5kid.c
3dsz.b
3dtq.b
5mhh.a
[1] 1l6m.a
0
0.8 1.5 0.7 0.9 1.4 1.3 0.8 0.9 1.2 1.0 0.4 0.7 1.3 1.3 1.5 0.7 0.9 0.5 0.8 0.9 0.8 1.3 0.5 1.1 1.3 1.7 1.4 1.2 0.8 1.2 0.6 1.1 0.9 1.1 1.2 0.9 0.9 1.4 1.2 1.3 1.2 1.4 1.4 1.3 1.0 2.2 1.4 1.4
[1] 1l6m.c 0.8
0
0.9 0.7 0.8 1.4 1.4 0.7 0.8 0.7 0.6 0.6 0.7 0.6 1.2 0.9 0.8 0.4 0.8 0.8 0.7 0.8 0.7 0.9 0.6 1.3 1.2 1.4 0.9 1.0 1.0 0.8 1.0 1.2 0.7 0.9 1.1 1.1 1.1 0.9 1.0 0.8 1.5 1.4 1.1 0.7 3.4 1.1 1.4
[1] 1qqs.a 1.5 0.9
0
1.4 1.5 1.7 1.6 1.0 1.1 1.4 1.4 1.0 1.1 1.4 1.1 1.4 1.5 1.4 1.1 1.4 0.9 1.0 1.3 1.5 1.3 1.6 1.6 1.2 1.5 1.2 1.4 1.5 0.9 1.2 1.4 1.4 1.4 1.5 1.4 1.5 1.6 1.5 1.2 1.2 1.6 1.4 3.4 1.8 1.4
[1] 1x71.a 0.7 0.7 1.4
0
0.7 1.0 1.0 0.5 0.7 1.0 1.4 0.6 0.7 1.2 0.9 1.3 0.8 0.9 0.7 0.8 0.5 0.9 1.4 0.7 1.4 1.2 1.5 1.2 1.5 0.9 1.1 0.7 0.7 0.7 0.9 1.6 0.7 0.7 1.4 1.4 1.5 1.5 0.9 1.1 1.5 0.9 3.4 1.0 1.4
[1] 1x71.c 0.9 0.8 1.5 0.7
0
1.2 1.1 0.6 0.8 1.1 1.0 0.7 0.8 1.5 0.9 1.5 1.0 0.9 0.8 1.0 0.9 0.9 1.2 0.9 1.2 1.2 1.6 1.2 1.2 1.0 1.2 0.8 0.7 0.9 1.2 1.3 0.9 0.9 1.1 1.3 1.4 1.3 0.8 1.0 1.3 1.1 3.4 1.4 1.3
[1] 1x89.a 1.4 1.4 1.7 1.0 1.2
0
0.3 0.8 0.9 1.0 1.0 1.3 0.7 1.6 1.1 1.6 1.0 1.4 1.3 1.4 1.3 0.8 1.4 1.3 1.5 1.1 1.2 0.6 1.2 0.8 1.1 1.2 1.3 1.4 1.4 1.5 1.0 1.1 1.3 1.7 1.8 1.7 1.4 1.2 1.7 1.3 3.3 1.4 1.9
[1] 1x8u.a 1.3 1.4 1.6 1.0 1.1 0.3
0
0.7 0.8 0.9 1.2 1.3 0.7 1.6 1.1 1.6 0.7 1.3 1.3 1.4 1.2 0.8 1.6 1.3 1.7 1.2 1.2 0.6 1.2 0.8 1.1 1.2 1.3 1.4 1.4 1.7 1.0 1.0 1.4 1.7 1.8 1.8 1.3 1.2 1.8 1.2 2.1 1.0 1.9
[1] 3by0.a 0.8 0.7 1.0 0.5 0.6 0.8 0.7
0
0.6 0.8 0.7 0.6 0.7 0.9 0.7 0.6 0.9 0.6 0.7 0.7 0.8 0.8 0.9 0.8 0.8 0.8 0.8 0.8 1.0 0.9 1.0 0.6 0.7 0.9 0.9 0.9 0.7 0.7 0.7 1.0 1.0 0.8 0.9 0.8 0.9 0.9 3.4 1.4 1.3
[1] 3by0.b 0.9 0.8 1.1 0.7 0.8 0.9 0.8 0.6
0
0.8 0.8 0.7 0.7 0.9 0.8 0.8 0.8 0.8 0.8 0.9 0.7 0.7 0.8 0.8 1.0 0.8 0.9 0.8 1.1 1.0 1.1 0.8 0.8 0.9 0.8 1.1 0.9 0.8 0.8 0.9 0.9 0.9 1.0 1.0 1.0 1.0 3.5 1.0 1.4
[1] 3by0.c 1.2 0.7 1.4 1.0 1.1 1.0 0.9 0.8 0.8
0
0.5 0.7 0.8 0.9 0.6 0.8 1.2 0.6 0.8 0.9 0.6 0.8 0.4 1.0 0.8 1.0 0.9 0.7 1.0 1.0 1.1 0.9 0.6 0.9 0.7 0.9 1.0 0.9 0.5 0.9 0.9 0.9 0.8 0.9 0.8 1.0 3.6 1.6 1.2
[1] 3cbc.c 1.0 0.6 1.4 1.4 1.0 1.0 1.2 0.7 0.8 0.5
0
0.7 0.8 0.6 0.7 0.6 1.3 0.6 0.8 0.9 0.6 0.8 0.6 0.9 0.7 1.6 0.9 0.9 0.8 0.9 1.1 1.1 0.5 0.9 0.7 0.8 0.9 0.9 0.5 0.8 0.9 0.8 0.9 1.0 1.0 0.8 2.5 1.8 1.2
[1] 3cmp.a 0.4 0.6 1.0 0.6 0.7 1.3 1.3 0.6 0.7 0.7 0.7
0
0.7 0.5 1.2 1.0 0.4 0.6 0.4 0.5 0.7 0.6 0.7 0.4 0.6 1.2 1.3 1.4 0.9 0.8 1.0 0.5 1.1 1.0 0.7 0.9 0.9 0.9 1.1 0.8 0.9 0.8 1.4 1.3 1.0 0.8 2.5 1.0 1.3
[1] 3cmp.b 0.7 0.7 1.1 0.7 0.8 0.7 0.7 0.7 0.7 0.8 0.8 0.7
0
0.8 0.8 0.8 0.7 0.7 0.7 0.8 0.7 0.8 0.8 0.7 0.8 0.7 0.8 0.7 1.1 0.9 1.0 0.7 0.8 0.7 0.9 1.1 0.7 0.7 0.8 0.8 0.9 0.8 1.0 0.9 1.0 0.9 2.0 0.8 1.2
[1] 3cmp.c 1.3 0.6 1.4 1.2 1.5 1.6 1.6 0.9 0.9 0.9 0.6 0.5 0.8
0
1.2 1.0 1.4 0.6 0.8 1.0 0.7 0.7 0.7 1.1 0.6 1.6 1.2 1.4 1.1 1.0 1.2 1.1 1.1 1.3 0.8 0.9 1.3 1.4 1.2 1.2 1.3 1.2 1.5 1.4 1.2 1.0 3.3 1.9 1.4
[1] 3fw4.c 1.3 1.2 1.1 0.9 0.9 1.1 1.1 0.7 0.8 0.6 0.7 1.2 0.8 1.2
0
0.7 0.8 1.1 1.4 1.3 1.2 0.7 1.3 1.3 1.2 0.9 0.9 1.1 0.8 0.9 1.0 1.3 0.7 0.9 1.3 1.4 1.3 1.3 1.0 1.3 1.4 1.3 1.4 0.9 1.4 0.9 2.6 1.1 1.6
[1] 3fw5.c 1.5 0.9 1.4 1.3 1.5 1.6 1.6 0.6 0.8 0.8 0.6 1.0 0.8 1.0 0.7
0
1.3 0.9 1.2 1.3 1.1 0.7 1.2 1.5 1.1 1.3 1.1 1.3 0.9 0.9 1.2 1.4 0.5 0.8 1.3 1.3 1.4 1.5 0.9 1.2 1.3 1.2 1.4 1.1 1.3 0.9 2.5 1.7 1.5
[1] 3hwd.a 0.7 0.8 1.5 0.8 1.0 1.0 0.7 0.9 0.8 1.2 1.3 0.4 0.7 1.4 0.8 1.3
0
0.9 0.5 0.7 1.0 0.7 1.5 0.5 1.4 1.1 1.3 0.8 1.4 0.8 1.1 0.6 0.8 0.8 1.2 1.4 0.6 0.6 1.4 1.2 1.3 1.3 0.8 0.9 1.3 1.1 2.8 1.2 1.4
[1] 3hwe.c 0.9 0.4 1.4 0.9 0.9 1.4 1.3 0.6 0.8 0.6 0.6 0.6 0.7 0.6 1.1 0.9 0.9
0
0.8 0.8 0.6 0.7 0.6 0.9 0.6 1.3 1.1 1.2 0.9 1.0 1.1 0.8 0.9 1.2 0.7 0.9 1.1 1.1 1.0 0.9 1.0 0.9 1.4 1.3 1.1 0.8 3.4 1.2 1.4
[1] 3hwf.a 0.5 0.8 1.1 0.7 0.8 1.3 1.3 0.7 0.8 0.8 0.8 0.4 0.7 0.8 1.4 1.2 0.5 0.8
0
0.5 0.6 0.8 0.8 0.5 0.8 1.3 1.3 1.4 1.0 0.8 1.0 0.5 1.2 1.1 0.7 0.9 0.8 0.8 1.1 1.0 1.0 0.9 1.3 1.4 1.1 0.9 2.2 1.1 1.4
[1] 3hwg.a 0.8 0.8 1.4 0.8 1.0 1.4 1.4 0.7 0.9 0.9 0.9 0.5 0.8 1.0 1.3 1.3 0.7 0.8 0.5
0
0.6 0.7 0.8 0.6 0.9 1.2 1.4 1.4 1.0 0.9 1.1 0.6 1.1 1.0 0.8 1.0 0.9 0.9 1.1 1.1 1.1 1.0 1.4 1.3 1.2 0.8 3.3 1.2 1.3
[1] 3i0a.a 0.9 0.7 0.9 0.5 0.9 1.3 1.2 0.8 0.7 0.6 0.6 0.7 0.7 0.7 1.2 1.1 1.0 0.6 0.6 0.6
0
0.7 0.5 0.6 0.7 1.4 1.2 1.3 1.0 0.8 1.0 0.5 1.0 1.2 0.6 0.8 0.9 0.8 1.0 1.1 1.2 1.1 1.3 1.3 1.1 0.9 3.3 1.4 1.5
[1] 3i0a.b 0.8 0.8 1.0 0.9 0.9 0.8 0.8 0.8 0.7 0.8 0.8 0.6 0.8 0.7 0.7 0.7 0.7 0.7 0.8 0.7 0.7
0
0.7 0.8 0.7 0.8 0.8 0.7 1.0 1.0 1.0 0.8 0.7 0.8 0.7 0.9 0.8 0.8 0.8 0.8 0.9 0.8 0.9 0.9 1.0 0.8 2.0 1.1 1.1
[1] 3i0a.c 1.3 0.7 1.3 1.4 1.2 1.4 1.6 0.9 0.8 0.4 0.6 0.7 0.8 0.7 1.3 1.2 1.5 0.6 0.8 0.8 0.5 0.7
0
1.0 0.7 1.9 1.3 1.3 1.0 1.0 1.2 1.2 1.0 1.4 0.7 0.7 1.1 1.1 0.9 1.1 1.2 1.1 1.3 1.4 1.1 1.0 2.8 2.1 1.4
[1] 3k3l.a 0.5 0.9 1.5 0.7 0.9 1.3 1.3 0.8 0.8 1.0 0.9 0.4 0.7 1.1 1.3 1.5 0.5 0.9 0.5 0.6 0.6 0.8 1.0
0
1.0 1.3 1.6 1.4 1.1 0.8 1.2 0.5 1.2 1.0 0.9 1.1 0.8 0.8 1.2 1.1 1.1 1.1 1.3 1.4 1.2 0.9 2.5 1.1 1.4
[1] 3k3l.c 1.1 0.6 1.3 1.4 1.2 1.5 1.7 0.8 1.0 0.8 0.7 0.6 0.8 0.6 1.2 1.1 1.4 0.6 0.8 0.9 0.7 0.7 0.7 1.0
0
1.7 1.3 1.4 1.0 1.0 1.1 1.2 1.1 1.2 0.7 0.8 1.2 1.3 1.1 1.1 1.1 1.0 1.6 1.5 1.2 0.8 3.2 1.8 1.4
[1] 3pec.a 1.3 1.3 1.6 1.2 1.2 1.1 1.2 0.8 0.8 1.0 1.6 1.2 0.7 1.6 0.9 1.3 1.1 1.3 1.3 1.2 1.4 0.8 1.9 1.3 1.7
0
1.2 1.1 1.6 0.7 1.1 1.5 1.1 1.0 1.5 1.9 1.2 1.2 1.8 1.8 1.8 1.8 1.5 0.9 1.8 1.1 2.6 1.6 1.8
[1] 3pec.c 1.7 1.2 1.6 1.5 1.6 1.2 1.2 0.8 0.9 0.9 0.9 1.3 0.8 1.2 0.9 1.1 1.3 1.1 1.3 1.4 1.2 0.8 1.3 1.6 1.3 1.2
0
0.5 0.9 1.0 1.3 1.5 1.1 1.4 1.4 1.4 1.4 1.4 1.1 1.6 1.6 1.6 1.3 1.2 1.6 1.1 2.5 1.7 1.8
[1] 3ped.b 1.4 1.4 1.2 1.2 1.2 0.6 0.6 0.8 0.8 0.7 0.9 1.4 0.7 1.4 1.1 1.3 0.8 1.2 1.4 1.4 1.3 0.7 1.3 1.4 1.4 1.1 0.5
0
0.9 0.9 0.9 1.4 1.3 1.5 1.4 1.5 1.1 1.2 1.1 1.6 1.6 1.6 1.3 1.3 1.6 1.1 2.0 1.1 1.9
[1] 3t1d.a 1.2 0.9 1.5 1.5 1.2 1.2 1.2 1.0 1.1 1.0 0.8 0.9 1.1 1.1 0.8 0.9 1.4 0.9 1.0 1.0 1.0 1.0 1.0 1.1 1.0 1.6 0.9 0.9
0
0.8 1.0 1.2 0.8 1.1 1.0 0.7 1.1 1.0 0.8 1.0 1.1 1.0 0.9 0.8 0.7 0.7 3.6 2.0 1.2
[1] 3t1d.b 0.8 1.0 1.2 0.9 1.0 0.8 0.8 0.9 1.0 1.0 0.9 0.8 0.9 1.0 0.9 0.9 0.8 1.0 0.8 0.9 0.8 1.0 1.0 0.8 1.0 0.7 1.0 0.9 0.8
0
0.7 0.7 0.9 0.8 0.9 0.8 0.8 0.8 1.0 1.0 1.0 1.0 1.1 0.8 0.9 0.8 3.5 1.2 1.3
[1] 3t1d.c 1.2 1.0 1.4 1.1 1.2 1.1 1.1 1.0 1.1 1.1 1.1 1.0 1.0 1.2 1.0 1.2 1.1 1.1 1.0 1.1 1.0 1.0 1.2 1.2 1.1 1.1 1.3 0.9 1.0 0.7
0
1.1 1.0 1.1 1.1 1.1 1.1 1.1 1.1 1.1 1.1 1.1 1.1 0.9 0.9 1.0 2.3 1.3 1.2
[1] 3tf6.a 0.6 0.8 1.5 0.7 0.8 1.2 1.2 0.6 0.8 0.9 1.1 0.5 0.7 1.1 1.3 1.4 0.6 0.8 0.5 0.6 0.5 0.8 1.2 0.5 1.2 1.5 1.5 1.4 1.2 0.7 1.1
0
1.1 1.0 0.8 1.2 0.7 0.7 1.4 1.2 1.3 1.3 1.3 1.3 1.3 0.8 2.1 1.1 1.4
[1] 3tzs.c 1.1 1.0 0.9 0.7 0.7 1.3 1.3 0.7 0.8 0.6 0.5 1.1 0.8 1.1 0.7 0.5 0.8 0.9 1.2 1.1 1.0 0.7 1.0 1.2 1.1 1.1 1.1 1.3 0.8 0.9 1.0 1.1
0
0.8 1.1 1.2 1.2 1.2 0.7 1.2 1.2 1.1 1.4 1.0 1.2 0.7 3.5 1.1 1.5
[1] 3u03.a 0.9 1.2 1.2 0.7 0.9 1.4 1.4 0.9 0.9 0.9 0.9 1.0 0.7 1.3 0.9 0.8 0.8 1.2 1.1 1.0 1.2 0.8 1.4 1.0 1.2 1.0 1.4 1.5 1.1 0.8 1.1 1.0 0.8
0
1.3 1.4 1.1 1.1 1.1 1.3 1.3 1.2 1.5 1.1 1.3 0.9 2.1 1.4 1.6
[1] 3u0d.a 1.1 0.7 1.4 0.9 1.2 1.4 1.4 0.9 0.8 0.7 0.7 0.7 0.9 0.8 1.3 1.3 1.2 0.7 0.7 0.8 0.6 0.7 0.7 0.9 0.7 1.5 1.4 1.4 1.0 0.9 1.1 0.8 1.1 1.3
0
0.8 1.0 1.0 1.1 1.1 1.1 1.1 1.3 1.4 1.0 0.9 2.3 1.6 1.4
[1] 4k19.c 1.2 0.9 1.4 1.6 1.3 1.5 1.7 0.9 1.1 0.9 0.8 0.9 1.1 0.9 1.4 1.3 1.4 0.9 0.9 1.0 0.8 0.9 0.7 1.1 0.8 1.9 1.4 1.5 0.7 0.8 1.1 1.2 1.2 1.4 0.8
0
1.2 1.2 1.1 1.2 1.2 1.2 1.5 1.4 1.0 0.5 3.4 1.9 1.3
[1] 4zfx.a 0.9 1.1 1.4 0.7 0.9 1.0 1.0 0.7 0.9 1.0 0.9 0.9 0.7 1.3 1.3 1.4 0.6 1.1 0.8 0.9 0.9 0.8 1.1 0.8 1.2 1.2 1.4 1.1 1.1 0.8 1.1 0.7 1.2 1.1 1.0 1.2
0
0.6 1.1 1.3 1.4 1.3 1.2 1.3 1.4 0.8 3.3 1.1 1.6
[1] 4zhc.a 0.9 1.1 1.5 0.7 0.9 1.1 1.0 0.7 0.8 0.9 0.9 0.9 0.7 1.4 1.3 1.5 0.6 1.1 0.8 0.9 0.8 0.8 1.1 0.8 1.3 1.2 1.4 1.2 1.0 0.8 1.1 0.7 1.2 1.1 1.0 1.2 0.6
0
1.0 1.3 1.4 1.3 1.0 1.3 1.3 0.9 3.4 1.0 1.7
[1] 4zhd.c 1.4 1.1 1.4 1.4 1.1 1.3 1.4 0.7 0.8 0.5 0.5 1.1 0.8 1.2 1.0 0.9 1.4 1.0 1.1 1.1 1.0 0.8 0.9 1.2 1.1 1.8 1.1 1.1 0.8 1.0 1.1 1.4 0.7 1.1 1.1 1.1 1.1 1.0
0
1.2 1.3 1.2 1.1 1.2 1.3 0.8 3.5 2.0 1.6
[1] 4zhf.c 1.2 0.9 1.5 1.4 1.3 1.7 1.7 1.0 0.9 0.9 0.8 0.8 0.8 1.2 1.3 1.2 1.2 0.9 1.0 1.1 1.1 0.8 1.1 1.1 1.1 1.8 1.6 1.6 1.0 1.0 1.1 1.2 1.2 1.3 1.1 1.2 1.3 1.3 1.2
0
0.2 0.6 1.6 1.5 0.7 1.0 3.6 1.7 1.3
[1] 4zhg.c 1.3 1.0 1.6 1.5 1.4 1.8 1.8 1.0 0.9 0.9 0.9 0.9 0.9 1.3 1.4 1.3 1.3 1.0 1.0 1.1 1.2 0.9 1.2 1.1 1.1 1.8 1.6 1.6 1.1 1.0 1.1 1.3 1.2 1.3 1.1 1.2 1.4 1.4 1.3 0.2
0
0.6 1.6 1.5 0.8 1.1 3.7 1.8 1.3
[1] 4zhh.b 1.2 0.8 1.5 1.5 1.3 1.7 1.8 0.8 0.9 0.9 0.8 0.8 0.8 1.2 1.3 1.2 1.3 0.9 0.9 1.0 1.1 0.8 1.1 1.1 1.0 1.8 1.6 1.6 1.0 1.0 1.1 1.3 1.1 1.2 1.1 1.2 1.3 1.3 1.2 0.6 0.6
0
1.6 1.5 0.8 0.9 3.6 1.9 1.3
[1] 5jr8.a 1.4 1.5 1.2 0.9 0.8 1.4 1.3 0.9 1.0 0.8 0.9 1.4 1.0 1.5 1.4 1.4 0.8 1.4 1.3 1.4 1.3 0.9 1.3 1.3 1.6 1.5 1.3 1.3 0.9 1.1 1.1 1.3 1.4 1.5 1.3 1.5 1.2 1.0 1.1 1.6 1.6 1.6
0
1.5 1.6 1.1 3.7 1.2 2.1
[1] 5khp.a 1.4 1.4 1.2 1.1 1.0 1.2 1.2 0.8 1.0 0.9 1.0 1.3 0.9 1.4 0.9 1.1 0.9 1.3 1.4 1.3 1.3 0.9 1.4 1.4 1.5 0.9 1.2 1.3 0.8 0.8 0.9 1.3 1.0 1.1 1.4 1.4 1.3 1.3 1.2 1.5 1.5 1.5 1.5
0
1.4 0.8 3.4 1.2 1.7
[1] 5kic.c 1.3 1.1 1.6 1.5 1.3 1.7 1.8 0.9 1.0 0.8 1.0 1.0 1.0 1.2 1.4 1.3 1.3 1.1 1.1 1.2 1.1 1.0 1.1 1.2 1.2 1.8 1.6 1.6 0.7 0.9 0.9 1.3 1.2 1.3 1.0 1.0 1.4 1.3 1.3 0.7 0.8 0.8 1.6 1.4
0
0.7 3.6 1.7 1.2
[1] 5kid.c 1.0 0.7 1.4 0.9 1.1 1.3 1.2 0.9 1.0 1.0 0.8 0.8 0.9 1.0 0.9 0.9 1.1 0.8 0.9 0.8 0.9 0.8 1.0 0.9 0.8 1.1 1.1 1.1 0.7 0.8 1.0 0.8 0.7 0.9 0.9 0.5 0.8 0.9 0.8 1.0 1.1 0.9 1.1 0.8 0.7
0
3.4 1.6 1.1
[2] 3dsz.b 2.2 3.4 3.4 3.4 3.4 3.3 2.1 3.4 3.5 3.6 2.5 2.5 2.0 3.3 2.6 2.5 2.8 3.4 2.2 3.3 3.3 2.0 2.8 2.5 3.2 2.6 2.5 2.0 3.6 3.5 2.3 2.1 3.5 2.1 2.3 3.4 3.3 3.4 3.5 3.6 3.7 3.6 3.7 3.4 3.6 3.4
0
1.6 3.6
[2] 3dtq.b 1.4 1.1 1.8 1.0 1.4 1.4 1.0 1.4 1.0 1.6 1.8 1.0 0.8 1.9 1.1 1.7 1.2 1.2 1.1 1.2 1.4 1.1 2.1 1.1 1.8 1.6 1.7 1.1 2.0 1.2 1.3 1.1 1.1 1.4 1.6 1.9 1.1 1.0 2.0 1.7 1.8 1.9 1.2 1.2 1.7 1.6 1.6
0
1.8
[3] 5mhh.a 1.4 1.4 1.4 1.4 1.3 1.9 1.9 1.3 1.4 1.2 1.2 1.3 1.2 1.4 1.6 1.5 1.4 1.4 1.4 1.3 1.5 1.1 1.4 1.4 1.4 1.8 1.8 1.9 1.2 1.3 1.2 1.4 1.5 1.6 1.4 1.3 1.6 1.7 1.6 1.3 1.3 1.3 2.1 1.7 1.2 1.1 3.6 1.8
0
[Binding site full-atom RMSD matrix]







[show 3D visualization]

[ENTRY 2D visualization]

L C X E | Background Color: | Anaglyph Stereo:

loading...