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LCK_HUMAN_227_506

Tyrosine-protein kinase Lck [Protein kinase superfamily. Tyr protein kinase family. SRC subfamily]

Composition of the binding site

Protein chains monomer [domain annotation]
A1 (LCK_HUMAN):D: Protein kinase (249, 251:254, 259, 271:273, 284, 285, 288, 291, 292, 295, 300, 301, 314, 316:323, 325, 326, 355, 360:364, 368, 369, 371, 380:389, 391, 392, 394, 395, 397)249, 251:254, 259, 271:273, 284, 285, 288, 291, 292, 295, 300, 301, 314, 316:323, 325, 326, 355, 360:364, 368, 369, 371, 380:389, 391, 392, 394, 395, 397

Full PDB list

1qpc, 1qpd, 1qpe, 1qpj, 2of2, 2of4, 2ofu, 2ofv, 2og8, 2pl0, 2zm1, 2zm4, 2zyb, 3ac1, 3ac2, 3ac3, 3ac4, 3ac5, 3ac8, 3acj, 3ack, 3ad4, 3ad5, 3ad6, 3b2w, 3bym, 3byo, 3bys, 3byu, 3kmm, 3kxz, 3lck, 3mpm, 4c3f

Pocket contact map

[download in TSV format]
   
PDB.ch
   
ligand
A1
E
2
4
9
L
2
5
1
G
2
5
2
V
2
5
9
A
2
7
1
V
2
7
2
K
2
7
3
E
2
8
8
L
2
9
1
M
2
9
2
L
2
9
5
L
3
0
0
V
3
0
1
I
3
1
4
T
3
1
6
E
3
1
7
Y
3
1
8
M
3
1
9
E
3
2
0
N
3
2
1
G
3
2
2
S
3
2
3
D
3
2
6
Y
3
6
0
I
3
6
1
H
3
6
2
A
3
6
8
N
3
6
9
L
3
7
1
I
3
8
0
A
3
8
1
D
3
8
2
F
3
8
3
G
3
8
4
I
3
8
9
[1]1qpc.a anp27 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]1qpd.a stu35 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]1qpe.a pp221 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]1qpj.a stu35 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]2of2.a 54730 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]2of4.a 97925 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]2ofu.a 1n950 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]2ofv.b 24231 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]2og8.b 1n841 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . -
[1]2pl0.a sti37 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]2zm1.a ksf23 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]2zm4.a ksm29 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]2zyb.a ksl24 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]3ac1.a kzi28 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]3ac2.a kse30 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]3ac3.a ksh32 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]3ac4.a kzl29 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]3ac5.a kzm38 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]3ac8.a ksk32 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]3acj.a kss22 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]3ack.a ksr21 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]3ad4.a kbm20 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]3ad5.a 5pb31 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]3ad6.a ksc27 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]3b2w.a 9nh45 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]3bym.a am035 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]3byo.a am940 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]3bys.a am543 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . -
[1]3byu.a am644 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . -
[1]3kmm.a lhl35 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]3kxz.a 92537 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]3lck.a none . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]3mpm.a 5lk30 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]4c3f.a 7kw24 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .

Legend

B backbone contact  S side chain contact  F BB + SCh
.
 no contact C covalent bond
X mutation to X * complex cases - deletion
M contact with cofactors/metals (if any)

Site contact map

[download in TSV format]
   
PDB.ch
A1
E
2
4
9
L
2
5
1
G
2
5
2
A
2
5
3
G
2
5
4
V
2
5
9
A
2
7
1
V
2
7
2
K
2
7
3
A
2
8
4
F
2
8
5
E
2
8
8
L
2
9
1
M
2
9
2
L
2
9
5
L
3
0
0
V
3
0
1
I
3
1
4
T
3
1
6
E
3
1
7
Y
3
1
8
M
3
1
9
E
3
2
0
N
3
2
1
G
3
2
2
S
3
2
3
V
3
2
5
D
3
2
6
I
3
5
5
Y
3
6
0
I
3
6
1
H
3
6
2
R
3
6
3
D
3
6
4
A
3
6
8
N
3
6
9
L
3
7
1
I
3
8
0
A
3
8
1
D
3
8
2
F
3
8
3
G
3
8
4
L
3
8
5
A
3
8
6
R
3
8
7
L
3
8
8
I
3
8
9
D
3
9
1
N
3
9
2
Y
3
9
4
T
3
9
5
R
3
9
7
[1]1qpc.a . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . * * . * . . . . . * . .
[1]1qpd.a . . . . . . . . . . . * . . . . . . . . . . . . . . . . . . . . . . . . . . . . * * . * . . . . A * . .
[1]1qpe.a . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . * * . * . . . . . * . .
[1]1qpj.a . * * . . . . . * . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . * * . * . . . . . * . .
[1]2of2.a . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . * * . * . . . . . . . .
[1]2of4.a . . . . . . . . . . . * . . . . . . . . . . . . . . . . . . . . . . . . . . . . * * . * . . . . . . . .
[1]2ofu.a . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . * * . * . . . . . * . .
[1]2ofv.b . * . . . . . . * . . . . . . . . . . . . . . . . . . . . * . . . . . . . . . . * . . . . . * . - - - -
[1]2og8.b . . . . . . . . . . . . . . . . . . . . . . . . . . . . . * . . . . . . . . . . * . . * - - - - - - - -
[1]2pl0.a . . . . . . . . . . . . . . . . . . . . . * * . . . . . . . . . . . . . . . . . * . . . . . . . . . . .
[1]2zm1.a . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . * * . * . . . . . * . .
[1]2zm4.a . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . * * . * . . . . . * . .
[1]2zyb.a . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . * * . * . . . . . * . .
[1]3ac1.a . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . * * . * . . . . . * . .
[1]3ac2.a . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . * * . * . . . . . * . .
[1]3ac3.a . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . * * . * . . . . . * . .
[1]3ac4.a . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . * * . * . . . . . * . .
[1]3ac5.a . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . * * . * . . . . . * . .
[1]3ac8.a . . . . . . . . * . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . * * * . * . . . . . * . .
[1]3acj.a . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . * * . * . . . . . * . .
[1]3ack.a . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . * * . * . . . . . * . .
[1]3ad4.a . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . * * . * . . . . . * . .
[1]3ad5.a . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . * * . * . . . . . * . .
[1]3ad6.a . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . * * . * . . . . . * . .
[1]3b2w.a . . . . . . . . * . . . . . . . . . . . . . * . . . . . . . . . . . . . . . . . * . . . . . . . . . . -
[1]3bym.a . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . * * . * . . . . . * . .
[1]3byo.a . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . * * . * . . . . . * . .
[1]3bys.a . . . . . . . . . . . . . . . . . . . . . . . . . . . . . * . . . . . . . . . . * . . - - - - - - - - -
[1]3byu.a . . . . . . . . . . . . . . . . . . . . . . . . . . . . . * . . . . . . . . . . * . . - - - - - - - - -
[1]3kmm.a . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . * * . * . . . . . * . .
[1]3kxz.a . . . . . . . . * . . * . . . . . . . . . . * . . . . . . . . . . . . . . . . . * . * * . . . . . * . .
[1]3lck.a . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . * * . * . . . . . * . .
[1]3mpm.a . . . . . . . . * . . * . . . . . . . . . . . . . . . . . . . . . N . . . . . . * * * . . . . . . * . *
[1]4c3f.a . . . . . . . . * . . * . . . . . . . . . . . . . . . . . . . . . N . . . . . . * * * . . . . . . . . .

Legend

B backbone contact  S side chain contact  F BB + SCh
.
 no contact C covalent bond
X X X X X  clash
X mutation to X * complex cases - deletion
M contact with cofactors/metals (if any)

Pocket-ligand steric compatibility

Ligands (x) vs pockets (y) colored by number of steric clashes

zoom: [−] [+]; [view as image]; [download as text]

pocketligand
≥10
9
8
7
6
5
4
3
2
1
0
1qpc.a:anp
1qpd.a:stu
1qpe.a:pp2
1qpj.a:stu
2of2.a:547
2of4.a:979
2ofu.a:1n9
2ofv.b:242
2og8.b:1n8
2pl0.a:sti
2zm1.a:ksf
2zm4.a:ksm
2zyb.a:ksl
3ac1.a:kzi
3ac2.a:kse
3ac3.a:ksh
3ac4.a:kzl
3ac5.a:kzm
3ac8.a:ksk
3acj.a:kss
3ack.a:ksr
3ad4.a:kbm
3ad5.a:5pb
3ad6.a:ksc
3b2w.a:9nh
3bym.a:am0
3byo.a:am9
3bys.a:am5
3byu.a:am6
3kmm.a:lhl
3kxz.a:925
3lck.a is apo
3mpm.a:5lk
4c3f.a:7kw
[1] 1qpc.a
0
0 0 0.1 0 0 0.6 6.3 9.2 8.3 0 0.1 0.2 0 0.1 0.1 0 0.1 0.2 0 0 0 0.1 0 5.3 0.2 0.3 6.2 6.5 0 0.2 - 0 0.1
[1] 1qpd.a 0.3
0
0.4 0.1 0 0.1 0.6 6.2 9.8 8.6 0.2 0.3 0.2 0.2 0.3 0.2 0.8 0.2 0.2 0.2 0.2 0 0.5 0 5.7 0.2 1.3 6.1 6.6 0.1 0.4 - 0.1 0.2
[1] 1qpe.a 0 0.1
0
0.5 0.1 0.1 1.1 5.9 8.0 8.1 0 0.2 0 0.1 0.1 0 0 0.6 0.1 0 0 0 0.4 0 4.8 0.3 0.6 5.7 6.3 0.2 0.2 - 0.1 0.1
[1] 1qpj.a 1.5 0 0.4
0.1
0.1 0.5 1.4 6.4 8.9 8.4 0.6 1.1 0.4 0.6 0.6 0.5 1.7 0.5 0.2 0.7 0.5 0 0.4 0.2 5.6 0.5 2.6 6.2 6.4 0.4 0.7 - 0.1 0.2
[1] 2of2.a 0 0 0.1 0
0
0 0.4 6.0 8.5 8.1 0 0.1 0 0 0.1 0 0.2 0 0 0 0.1 0 0.2 0.2 4.9 0.1 0.3 5.8 6.4 0 0.2 - 0 0.1
[1] 2of4.a 0.1 0 0.1 0 0
0
0.3 5.9 8.7 8.2 0 0.1 0 0 0.1 0.1 0.3 0 0 0.1 0.1 0 0.2 0.2 4.9 0 0.4 5.7 6.6 0 0.2 - 0.2 0.1
[1] 2ofu.a 0 0 0.1 0 0 0
0
6.3 8.8 7.8 0.1 0.1 0.1 0.1 0.1 0 0.3 0.1 0.1 0.1 0.1 0 0.2 0.2 5.6 0 0.1 6.1 6.2 0.1 0.3 - 0.2 0.3
[1] 2ofv.b 1.9 4.1 0.7 4.9 4.3 3.6 5.6
0
1.8 3.2 0.5 0.8 0.3 2.3 1.4 1.5 2.0 3.0 4.1 1.3 0.6 0.4 2.4 2.6 0.5 1.2 3.6 0.4 0.5 1.2 0.3 - 0.7 1.0
[1] 2og8.b 2.4 4.4 0.2 4.9 4.5 2.9 4.7 0.2
0
3.0 0.2 0.4 0.1 1.1 1.1 0.5 0.6 1.6 3.2 0.3 0.3 0.3 1.8 2.1 0.2 1.1 1.3 0.2 0.3 0.7 0.3 - 0.6 0.8
[1] 2pl0.a 0.1 2.8 0.3 3.5 4.2 2.5 4.0 0.2 0.6
0
0.3 0.1 0.3 0.8 1.3 1.0 0.9 2.5 3.8 0.6 0.3 0.5 1.3 1.9 0.7 0.7 2.0 0.8 1.2 1.8 0.8 - 1.3 0.9
[1] 2zm1.a 0 0 0 0 0 0 0.3 6.0 8.0 8.3
0
0.1 0 0 0.1 0 0.1 0.1 0 0 0 0 0.5 0.2 5.0 0.1 0.4 5.7 6.7 0 0.2 - 0.2 0.1
[1] 2zm4.a 0.1 0 0 0 0.1 0.1 0.4 6.2 9.3 7.8 0
0
0.1 0.1 0.1 0.1 0 0.2 0.1 0.1 0.1 0.1 0.3 0.1 5.0 0 0.3 6.1 6.1 0.2 0.1 - 0.2 0.4
[1] 2zyb.a 0 0 0 0.1 0 0 0.4 5.7 8.8 7.5 0 0
0
0 0.1 0 0 0.1 0.2 0 0 0.1 0.2 0.1 4.7 0 0.2 5.8 5.8 0 0.2 - 0.2 0.1
[1] 3ac1.a 0 0 0 0 0 0 0.4 6.2 8.8 8.3 0.1 0.1 0.2
0
0 0 0 0.1 0.1 0 0 0 0.2 0.2 5.8 0.1 0.3 5.8 6.5 0 0.2 - 0 0.2
[1] 3ac2.a 0 0 0 0 0 0 0.4 6.2 9.0 8.4 0.1 0.1 0.1 0
0
0 0 0.1 0.2 0 0 0 0.2 0 5.6 0.1 0.3 6.2 6.5 0 0.2 - 0 0.2
[1] 3ac3.a 0 0 0 0 0 0 0.4 6.3 8.9 8.4 0.1 0.2 0.1 0 0
0
0 0.1 0.1 0 0 0 0.1 0 6.2 0.1 0.3 6.2 6.6 0 0.3 - 0.1 0.3
[1] 3ac4.a 0 0 0 0 0 0 0.3 6.4 8.6 7.4 0.1 0 0.1 0 0 0
0
0.1 0.1 0 0 0 0.1 0 5.8 0.1 0.1 6.2 6.2 0 0.2 - 0 0.2
[1] 3ac5.a 0 0 0 0.2 0.3 0.1 0.5 6.2 9.0 8.3 0.1 0 0.1 0 0 0 0
0
0.2 0 0 0.1 0.3 0.1 5.5 0.1 0.5 5.7 6.1 0 0.2 - 0.2 0.2
[1] 3ac8.a 0 1.0 0.3 1.0 0.3 0 2.1 6.5 8.5 8.8 0.2 0.9 0.1 0 0.6 0.1 0 0.9
0
0 0 0.4 0.9 0 5.4 0.8 1.3 5.7 6.3 0.6 0.2 - 0.2 0.2
[1] 3acj.a 0 0 0 0 0 0 0.6 6.2 8.9 8.4 0.2 0.2 0.2 0 0 0 0 0.1 0.1
0
0 0 0.2 0 5.8 0.1 0.3 6.1 6.6 0 0.2 - 0.1 0.2
[1] 3ack.a 0 0 0 0.1 0.3 0.1 0.6 5.9 8.6 8.0 0.1 0.2 0.1 0 0 0 0 0.1 0.1 0
0
0 0.2 0 5.1 0.1 0.3 6.1 6.3 0 0.1 - 0.1 0.2
[1] 3ad4.a 0 0 0 0 0 0 0.4 6.5 8.8 8.5 0.2 0.2 0.2 0 0 0 0 0.1 0.2 0 0
0
0.2 0 5.7 0.1 0.3 6.1 6.4 0 0.2 - 0 0.2
[1] 3ad5.a 0 0 0.1 0 0 0 0.5 6.0 9.2 8.1 0.2 0.1 0.2 0 0 0 0 0.1 0.1 0 0 0
0.2
0 5.7 0.1 0.2 6.3 6.6 0.1 0.3 - 0.1 0.3
[1] 3ad6.a 0 0 0.1 0 0 0 0.6 6.5 9.3 8.3 0.1 0.1 0.1 0 0 0 0 0.1 0.1 0 0 0 0.2
0
5.5 0.1 0.3 6.4 6.6 0 0.3 - 0.2 0.2
[1] 3b2w.a 1.1 0.2 0.5 0.4 0.8 0.4 2.0 1.0 0.9 3.8 0.4 0.7 0.5 1.6 1.3 1.3 1.4 2.2 0.6 1.0 0.5 0.4 1.5 0.9
0.1
1.5 2.5 1.4 1.6 1.1 0.4 - 0.8 0.6
[1] 3bym.a 0.1 0 0.1 0 0 0 0.2 6.0 8.5 8.3 0 0.1 0 0 0.1 0 0.5 0.1 0.1 0.1 0.1 0 0.2 0.2 5.0
0
0.4 5.5 6.2 0 0.2 - 0.2 0.1
[1] 3byo.a 0 0 0 0 0 0 0.2 5.8 8.4 8.2 0 0 0.1 0 0.1 0 0.1 0.1 0.1 0 0 0 0.2 0 5.5 0.1
0
5.6 5.8 0 0.1 - 0 0.1
[1] 3bys.a 0.2 2.8 0.3 3.4 3.7 2.5 3.8 0.2 0.2 2.8 0.1 0.3 0.1 0.2 0.3 0.3 0.5 0.7 3.3 0.1 0.1 0.1 1.2 1.6 0.1 0.3 1.2
0
0 0.4 0.4 - 0.2 0.5
[1] 3byu.a 0.4 2.8 0.2 3.4 3.7 2.7 3.6 0.1 0.4 2.5 0.1 0.3 0.1 0.2 0.4 0.6 1.0 0.4 3.1 0.1 0.4 0.1 1.1 2.0 0.1 0.3 0.9 0
0
0.3 0.2 - 0.3 0.3
[1] 3kmm.a 0 0 0 0 0 0 0.3 6.5 9.0 7.7 0 0 0 0.1 0.1 0 0.1 0.2 0 0 0.1 0 0.2 0.1 5.4 0.1 0.3 5.9 5.9
0.1
0.2 - 0.1 0.1
[1] 3kxz.a 0.5 0.8 0.2 0.7 0.3 0.1 2.0 6.9 8.0 8.9 0.2 0.4 0.2 0.7 1.0 0.7 1.0 0.8 0.3 0.8 0.6 0.2 1.3 0.6 6.3 1.1 2.2 7.3 6.8 0.5
0
- 0.7 0.3
[1] 3lck.a 0 0 0 0 0 0 0.5 6.0 8.8 8.3 0.1 0.2 0.1 0 0.1 0 0 0.1 0 0 0 0 0.1 0 5.2 0.1 0.4 5.9 6.5 0 0.2
-
0 0.2
[1] 3mpm.a 1.5 1.6 0.3 1.4 0 0.1 2.4 5.7 7.4 7.6 0.4 1.1 0.5 0.7 0.4 0.2 0.5 1.9 0.1 0 0.2 0.1 0.5 0 5.1 0.9 1.1 5.1 6.0 0.5 0.5 -
0
0.1
[1] 4c3f.a 1.6 1.2 0.4 1.2 0.1 0.2 2.4 5.7 7.3 7.8 0.5 0.8 0.6 1.1 1.2 0.5 0.7 2.0 0.2 0.1 0.4 0.1 0.5 0.1 5.0 1.0 1.4 4.8 5.8 0.6 0.4 - 0.3
0
[Pocket-ligand steric clashes matrix]

Pocket clash dissimilarity (1 cluster)

Pockets (x) vs pockets (y) colored by ligand clash profile difference

zoom: [−] [+]; [view as image]; [download as text]

pocketpocket
≥1.
.9
.8
.7
.6
.5
.4
.3
.2
.1
.0
1qpc.a
1qpd.a
1qpe.a
1qpj.a
2of2.a
2of4.a
2ofu.a
2ofv.b
2og8.b
2pl0.a
2zm1.a
2zm4.a
2zyb.a
3ac1.a
3ac2.a
3ac3.a
3ac4.a
3ac5.a
3ac8.a
3acj.a
3ack.a
3ad4.a
3ad5.a
3ad6.a
3b2w.a
3bym.a
3byo.a
3bys.a
3byu.a
3kmm.a
3kxz.a
3lck.a
3mpm.a
4c3f.a
[1] 1qpc.a
0
.04 .04 .09 .04 .05 .04 .31 .21 .23 .04 .03 .04 .03 .02 .02 .04 .04 .06 .03 .03 .03 .02 .02 .25 .04 .03 .24 .24 .04 .13 .01 .20 .20
[1] 1qpd.a .04
0
.07 .08 .06 .05 .07 .29 .23 .25 .06 .05 .05 .06 .05 .05 .07 .05 .09 .06 .05 .06 .05 .05 .23 .04 .07 .25 .24 .05 .11 .05 .22 .22
[1] 1qpe.a .04 .07
0
.10 .04 .05 .04 .29 .18 .20 .04 .04 .05 .03 .03 .03 .04 .05 .05 .03 .03 .03 .04 .04 .23 .05 .03 .21 .21 .04 .13 .04 .21 .21
[1] 1qpj.a .09 .08 .10
0
.10 .09 .09 .26 .25 .27 .11 .09 .11 .09 .10 .09 .09 .09 .08 .08 .09 .10 .10 .09 .22 .09 .10 .27 .26 .10 .12 .09 .25 .23
[1] 2of2.a .04 .06 .04 .10
0
.01 .04 .28 .19 .21 .02 .03 .03 .03 .03 .03 .04 .04 .07 .03 .04 .05 .03 .04 .23 .02 .04 .21 .21 .03 .12 .03 .21 .21
[1] 2of4.a .05 .05 .05 .09 .01
0
.05 .28 .20 .22 .02 .04 .03 .04 .04 .04 .05 .05 .07 .04 .05 .06 .04 .05 .23 .02 .05 .21 .21 .03 .11 .04 .21 .21
[1] 2ofu.a .04 .07 .04 .09 .04 .05
0
.29 .19 .21 .05 .04 .06 .03 .04 .03 .02 .03 .07 .03 .04 .03 .03 .04 .24 .04 .03 .21 .21 .04 .13 .04 .22 .21
[1] 2ofv.b .31 .29 .29 .26 .28 .28 .29
0
.17 .19 .28 .30 .29 .29 .31 .30 .28 .28 .27 .30 .29 .30 .31 .31 .16 .28 .29 .13 .13 .29 .25 .29 .31 .28
[1] 2og8.b .21 .23 .18 .25 .19 .20 .19 .17
0
.14 .19 .20 .20 .18 .20 .20 .18 .20 .21 .19 .18 .19 .20 .20 .21 .19 .18 .09 .11 .19 .24 .20 .33 .30
[1] 2pl0.a .23 .25 .20 .27 .21 .22 .21 .19 .14
0
.21 .22 .22 .21 .22 .22 .20 .21 .23 .21 .21 .22 .23 .22 .09 .21 .20 .12 .13 .21 .24 .22 .26 .24
[1] 2zm1.a .04 .06 .04 .11 .02 .02 .05 .28 .19 .21
0
.05 .02 .04 .04 .04 .05 .04 .07 .04 .05 .05 .04 .05 .24 .03 .05 .21 .21 .02 .11 .04 .20 .21
[1] 2zm4.a .03 .05 .04 .09 .03 .04 .04 .30 .20 .22 .05
0
.05 .03 .03 .03 .03 .04 .07 .03 .02 .03 .03 .02 .24 .04 .04 .22 .22 .04 .13 .04 .22 .22
[1] 2zyb.a .04 .05 .05 .11 .03 .03 .06 .29 .20 .22 .02 .05
0
.05 .04 .04 .06 .05 .08 .05 .05 .05 .04 .05 .25 .04 .06 .23 .22 .03 .12 .04 .20 .20
[1] 3ac1.a .03 .06 .03 .09 .03 .04 .03 .29 .18 .21 .04 .03 .05
0
.02 .01 .02 .02 .06 .01 .02 .02 .02 .02 .24 .03 .03 .22 .22 .03 .12 .03 .22 .21
[1] 3ac2.a .02 .05 .03 .10 .03 .04 .04 .31 .20 .22 .04 .03 .04 .02
0
.01 .03 .03 .06 .02 .02 .02 .01 .02 .25 .03 .03 .23 .23 .03 .12 .02 .21 .21
[1] 3ac3.a .02 .05 .03 .09 .03 .04 .03 .30 .20 .22 .04 .03 .04 .01 .01
0
.02 .03 .06 .01 .02 .02 .02 .02 .25 .03 .02 .22 .22 .03 .13 .02 .21 .21
[1] 3ac4.a .04 .07 .04 .09 .04 .05 .02 .28 .18 .20 .05 .03 .06 .02 .03 .02
0
.03 .05 .02 .03 .03 .03 .03 .24 .05 .02 .21 .21 .04 .14 .04 .22 .21
[1] 3ac5.a .04 .05 .05 .09 .04 .05 .03 .28 .20 .21 .04 .04 .05 .02 .03 .03 .03
0
.06 .02 .03 .04 .03 .03 .23 .04 .03 .22 .22 .03 .12 .03 .20 .19
[1] 3ac8.a .06 .09 .05 .08 .07 .07 .07 .27 .21 .23 .07 .07 .08 .06 .06 .06 .05 .06
0
.06 .06 .06 .07 .07 .22 .08 .07 .23 .23 .07 .12 .06 .20 .20
[1] 3acj.a .03 .06 .03 .08 .03 .04 .03 .30 .19 .21 .04 .03 .05 .01 .02 .01 .02 .02 .06
0
.02 .02 .02 .01 .24 .04 .02 .22 .23 .03 .13 .02 .21 .21
[1] 3ack.a .03 .05 .03 .09 .04 .05 .04 .29 .18 .21 .05 .02 .05 .02 .02 .02 .03 .03 .06 .02
0
.01 .02 .02 .24 .04 .03 .22 .22 .04 .14 .03 .22 .22
[1] 3ad4.a .03 .06 .03 .10 .05 .06 .03 .30 .19 .22 .05 .03 .05 .02 .02 .02 .03 .04 .06 .02 .01
0
.02 .02 .25 .05 .03 .23 .23 .04 .14 .04 .22 .22
[1] 3ad5.a .02 .05 .04 .10 .03 .04 .03 .31 .20 .23 .04 .03 .04 .02 .01 .02 .03 .03 .07 .02 .02 .02
0
.02 .26 .04 .03 .24 .24 .03 .13 .03 .22 .21
[1] 3ad6.a .02 .05 .04 .09 .04 .05 .04 .31 .20 .22 .05 .02 .05 .02 .02 .02 .03 .03 .07 .01 .02 .02 .02
0
.25 .04 .03 .23 .23 .04 .14 .03 .22 .22
[1] 3b2w.a .25 .23 .23 .22 .23 .23 .24 .16 .21 .09 .24 .24 .25 .24 .25 .25 .24 .23 .22 .24 .24 .25 .26 .25
0
.23 .24 .15 .15 .24 .19 .24 .26 .24
[1] 3bym.a .04 .04 .05 .09 .02 .02 .04 .28 .19 .21 .03 .04 .04 .03 .03 .03 .05 .04 .08 .04 .04 .05 .04 .04 .23
0
.04 .21 .20 .03 .11 .03 .21 .21
[1] 3byo.a .03 .07 .03 .10 .04 .05 .03 .29 .18 .20 .05 .04 .06 .03 .03 .02 .02 .03 .07 .02 .03 .03 .03 .03 .24 .04
0
.22 .22 .03 .13 .03 .21 .22
[1] 3bys.a .24 .25 .21 .27 .21 .21 .21 .13 .09 .12 .21 .22 .23 .22 .23 .22 .21 .22 .23 .22 .22 .23 .24 .23 .15 .21 .22
0
.02 .22 .27 .23 .27 .27
[1] 3byu.a .24 .24 .21 .26 .21 .21 .21 .13 .11 .13 .21 .22 .22 .22 .23 .22 .21 .22 .23 .23 .22 .23 .24 .23 .15 .20 .22 .02
0
.22 .25 .23 .27 .26
[1] 3kmm.a .04 .05 .04 .10 .03 .03 .04 .29 .19 .21 .02 .04 .03 .03 .03 .03 .04 .03 .07 .03 .04 .04 .03 .04 .24 .03 .03 .22 .22
0
.12 .03 .20 .20
[1] 3kxz.a .13 .11 .13 .12 .12 .11 .13 .25 .24 .24 .11 .13 .12 .12 .12 .13 .14 .12 .12 .13 .14 .14 .13 .14 .19 .11 .13 .27 .25 .12
0
.12 .23 .21
[1] 3lck.a .01 .05 .04 .09 .03 .04 .04 .29 .20 .22 .04 .04 .04 .03 .02 .02 .04 .03 .06 .02 .03 .04 .03 .03 .24 .03 .03 .23 .23 .03 .12
0
.19 .19
[1] 3mpm.a .20 .22 .21 .25 .21 .21 .22 .31 .33 .26 .20 .22 .20 .22 .21 .21 .22 .20 .20 .21 .22 .22 .22 .22 .26 .21 .21 .27 .27 .20 .23 .19
0
.03
[1] 4c3f.a .20 .22 .21 .23 .21 .21 .21 .28 .30 .24 .21 .22 .20 .21 .21 .21 .21 .19 .20 .21 .22 .22 .21 .22 .24 .21 .22 .27 .26 .20 .21 .19 .03
0
[Pocket clash dissimilarity matrix]

Site backbone RMSD (median 1.0 Å)

Pockets (x) vs pockets (y) colored by RMSD of site residue backbone atoms

zoom: [−] [+]; [view as image]; [download as text]

pocketpocket
≥10 Å
9 Å
8 Å
7 Å
6 Å
5 Å
4 Å
3 Å
2 Å
1 Å
0 Å
1qpc.a
1qpd.a
1qpe.a
1qpj.a
2of2.a
2of4.a
2ofu.a
2ofv.b
2og8.b
2pl0.a
2zm1.a
2zm4.a
2zyb.a
3ac1.a
3ac2.a
3ac3.a
3ac4.a
3ac5.a
3ac8.a
3acj.a
3ack.a
3ad4.a
3ad5.a
3ad6.a
3b2w.a
3bym.a
3byo.a
3bys.a
3byu.a
3kmm.a
3kxz.a
3lck.a
3mpm.a
4c3f.a
[1] 1qpc.a
0
0.5 0.3 0.9 0.3 0.3 0.4 4.7 3.5 10 0.4 0.3 0.3 0.3 0.3 0.3 0.4 0.3 0.5 0.3 0.3 0.3 0.3 0.3 5.5 0.3 0.3 2.1 2.1 0.4 1.3 0.2 9.3 9.2
[1] 1qpd.a 0.5
0
0.5 0.6 0.5 0.4 0.6 4.7 3.6 10 0.5 0.6 0.5 0.6 0.6 0.7 0.7 0.5 0.6 0.6 0.6 0.6 0.6 0.7 5.5 0.4 0.6 2.1 2.1 0.6 1.2 0.6 9.4 9.3
[1] 1qpe.a 0.3 0.5
0
0.9 0.3 0.3 0.5 4.8 3.6 10 0.4 0.4 0.4 0.4 0.4 0.4 0.4 0.3 0.4 0.4 0.3 0.4 0.4 0.4 5.5 0.4 0.4 2.2 2.1 0.4 1.2 0.3 9.4 9.3
[1] 1qpj.a 0.9 0.6 0.9
0
0.9 0.8 0.9 4.6 3.6 10 0.9 0.9 0.9 0.9 0.9 1.0 1.0 0.9 1.0 1.0 0.9 1.0 1.0 1.0 5.4 0.8 1.1 2.2 2.1 0.9 1.2 1.0 9.4 9.3
[1] 2of2.a 0.3 0.5 0.3 0.9
0
0.1 0.5 4.8 3.6 10 0.4 0.5 0.4 0.4 0.4 0.5 0.5 0.3 0.5 0.4 0.4 0.5 0.4 0.5 5.5 0.3 0.4 2.1 2.1 0.4 1.2 0.3 9.4 9.3
[1] 2of4.a 0.3 0.4 0.3 0.8 0.1
0
0.4 4.7 3.5 10 0.4 0.4 0.4 0.4 0.4 0.5 0.5 0.3 0.5 0.4 0.4 0.5 0.4 0.5 5.5 0.2 0.5 2.1 2.1 0.4 1.2 0.3 9.4 9.3
[1] 2ofu.a 0.4 0.6 0.5 0.9 0.5 0.4
0
4.7 3.5 10 0.4 0.5 0.5 0.3 0.4 0.5 0.5 0.4 0.5 0.4 0.5 0.5 0.4 0.4 5.5 0.3 0.5 2.1 2.0 0.5 1.3 0.5 9.3 9.2
[1] 2ofv.b 4.7 4.7 4.8 4.6 4.8 4.7 4.7
0
2.2 4.8 4.8 4.8 4.7 4.8 4.8 4.8 4.9 4.8 4.9 4.8 4.8 4.8 4.8 4.8 4.2 4.7 4.8 1.6 1.6 4.8 5.0 4.7 5.1 5.1
[1] 2og8.b 3.5 3.6 3.6 3.6 3.6 3.5 3.5 2.2
0
1.8 3.5 3.5 3.5 3.5 3.5 3.6 3.6 3.5 3.6 3.5 3.6 3.5 3.5 3.5 4.0 3.5 3.5 1.1 1.2 3.5 3.9 3.5 4.1 4.2
[1] 2pl0.a 10 10 10 10 10 10 10 4.8 1.8
0
10 10 10 10 10 10 10 10 10 10 10 10 10 10 6.6 10 10 1.5 1.6 10 11 10 6.9 6.8
[1] 2zm1.a 0.4 0.5 0.4 0.9 0.4 0.4 0.4 4.8 3.5 10
0
0.5 0.3 0.3 0.3 0.5 0.4 0.2 0.4 0.3 0.4 0.4 0.3 0.3 5.5 0.4 0.5 2.1 2.1 0.4 1.2 0.4 9.4 9.3
[1] 2zm4.a 0.3 0.6 0.4 0.9 0.5 0.4 0.5 4.8 3.5 10 0.5
0
0.4 0.4 0.4 0.3 0.4 0.4 0.6 0.4 0.3 0.3 0.4 0.4 5.5 0.4 0.5 2.1 2.1 0.4 1.3 0.4 9.5 9.3
[1] 2zyb.a 0.3 0.5 0.4 0.9 0.4 0.4 0.5 4.7 3.5 10 0.3 0.4
0
0.4 0.4 0.4 0.5 0.3 0.5 0.4 0.3 0.4 0.4 0.4 5.5 0.3 0.5 2.1 2.0 0.4 1.3 0.4 9.4 9.3
[1] 3ac1.a 0.3 0.6 0.4 0.9 0.4 0.4 0.3 4.8 3.5 10 0.3 0.4 0.4
0
0.2 0.4 0.3 0.2 0.4 0.2 0.3 0.3 0.2 0.2 5.5 0.3 0.4 2.1 2.1 0.4 1.3 0.3 9.4 9.3
[1] 3ac2.a 0.3 0.6 0.4 0.9 0.4 0.4 0.4 4.8 3.5 10 0.3 0.4 0.4 0.2
0
0.4 0.3 0.2 0.4 0.2 0.3 0.3 0.1 0.2 5.5 0.4 0.4 2.1 2.1 0.4 1.3 0.3 9.4 9.3
[1] 3ac3.a 0.3 0.7 0.4 1.0 0.5 0.5 0.5 4.8 3.6 10 0.5 0.3 0.4 0.4 0.4
0
0.3 0.4 0.5 0.3 0.2 0.2 0.4 0.4 5.6 0.4 0.4 2.2 2.1 0.4 1.3 0.3 9.5 9.4
[1] 3ac4.a 0.4 0.7 0.4 1.0 0.5 0.5 0.5 4.9 3.6 10 0.4 0.4 0.5 0.3 0.3 0.3
0
0.3 0.5 0.3 0.3 0.3 0.3 0.3 5.6 0.5 0.4 2.2 2.1 0.4 1.3 0.4 9.4 9.3
[1] 3ac5.a 0.3 0.5 0.3 0.9 0.3 0.3 0.4 4.8 3.5 10 0.2 0.4 0.3 0.2 0.2 0.4 0.3
0
0.4 0.2 0.3 0.3 0.3 0.3 5.5 0.3 0.4 2.1 2.1 0.3 1.2 0.3 9.4 9.3
[1] 3ac8.a 0.5 0.6 0.4 1.0 0.5 0.5 0.5 4.9 3.6 10 0.4 0.6 0.5 0.4 0.4 0.5 0.5 0.4
0
0.4 0.5 0.5 0.4 0.4 5.6 0.5 0.5 2.2 2.1 0.5 1.2 0.5 9.4 9.3
[1] 3acj.a 0.3 0.6 0.4 1.0 0.4 0.4 0.4 4.8 3.5 10 0.3 0.4 0.4 0.2 0.2 0.3 0.3 0.2 0.4
0
0.3 0.3 0.2 0.2 5.5 0.4 0.4 2.1 2.1 0.4 1.3 0.3 9.4 9.3
[1] 3ack.a 0.3 0.6 0.3 0.9 0.4 0.4 0.5 4.8 3.6 10 0.4 0.3 0.3 0.3 0.3 0.2 0.3 0.3 0.5 0.3
0
0.2 0.3 0.3 5.5 0.4 0.4 2.2 2.1 0.3 1.3 0.3 9.4 9.3
[1] 3ad4.a 0.3 0.6 0.4 1.0 0.5 0.5 0.5 4.8 3.5 10 0.4 0.3 0.4 0.3 0.3 0.2 0.3 0.3 0.5 0.3 0.2
0
0.3 0.3 5.5 0.4 0.4 2.2 2.1 0.4 1.4 0.3 9.4 9.3
[1] 3ad5.a 0.3 0.6 0.4 1.0 0.4 0.4 0.4 4.8 3.5 10 0.3 0.4 0.4 0.2 0.1 0.4 0.3 0.3 0.4 0.2 0.3 0.3
0
0.1 5.5 0.4 0.4 2.1 2.1 0.4 1.3 0.3 9.4 9.3
[1] 3ad6.a 0.3 0.7 0.4 1.0 0.5 0.5 0.4 4.8 3.5 10 0.3 0.4 0.4 0.2 0.2 0.4 0.3 0.3 0.4 0.2 0.3 0.3 0.1
0
5.5 0.4 0.4 2.1 2.1 0.4 1.4 0.3 9.4 9.3
[1] 3b2w.a 5.5 5.5 5.5 5.4 5.5 5.5 5.5 4.2 4.0 6.6 5.5 5.5 5.5 5.5 5.5 5.6 5.6 5.5 5.6 5.5 5.5 5.5 5.5 5.5
0
5.5 5.6 2.6 2.6 5.5 5.8 5.5 7.0 6.8
[1] 3bym.a 0.3 0.4 0.4 0.8 0.3 0.2 0.3 4.7 3.5 10 0.4 0.4 0.3 0.3 0.4 0.4 0.5 0.3 0.5 0.4 0.4 0.4 0.4 0.4 5.5
0
0.4 2.1 2.0 0.4 1.2 0.3 9.3 9.2
[1] 3byo.a 0.3 0.6 0.4 1.1 0.4 0.5 0.5 4.8 3.5 10 0.5 0.5 0.5 0.4 0.4 0.4 0.4 0.4 0.5 0.4 0.4 0.4 0.4 0.4 5.6 0.4
0
2.2 2.1 0.5 1.4 0.3 9.3 9.2
[1] 3bys.a 2.1 2.1 2.2 2.2 2.1 2.1 2.1 1.6 1.1 1.5 2.1 2.1 2.1 2.1 2.1 2.2 2.2 2.1 2.2 2.1 2.2 2.2 2.1 2.1 2.6 2.1 2.2
0
0.2 2.1 2.5 2.1 2.9 3.0
[1] 3byu.a 2.1 2.1 2.1 2.1 2.1 2.1 2.0 1.6 1.2 1.6 2.1 2.1 2.0 2.1 2.1 2.1 2.1 2.1 2.1 2.1 2.1 2.1 2.1 2.1 2.6 2.0 2.1 0.2
0
2.1 2.4 2.1 2.9 2.9
[1] 3kmm.a 0.4 0.6 0.4 0.9 0.4 0.4 0.5 4.8 3.5 10 0.4 0.4 0.4 0.4 0.4 0.4 0.4 0.3 0.5 0.4 0.3 0.4 0.4 0.4 5.5 0.4 0.5 2.1 2.1
0
1.2 0.4 9.5 9.4
[1] 3kxz.a 1.3 1.2 1.2 1.2 1.2 1.2 1.3 5.0 3.9 11 1.2 1.3 1.3 1.3 1.3 1.3 1.3 1.2 1.2 1.3 1.3 1.4 1.3 1.4 5.8 1.2 1.4 2.5 2.4 1.2
0
1.4 9.9 9.7
[1] 3lck.a 0.2 0.6 0.3 1.0 0.3 0.3 0.5 4.7 3.5 10 0.4 0.4 0.4 0.3 0.3 0.3 0.4 0.3 0.5 0.3 0.3 0.3 0.3 0.3 5.5 0.3 0.3 2.1 2.1 0.4 1.4
0
9.3 9.2
[1] 3mpm.a 9.3 9.4 9.4 9.4 9.4 9.4 9.3 5.1 4.1 6.9 9.4 9.5 9.4 9.4 9.4 9.5 9.4 9.4 9.4 9.4 9.4 9.4 9.4 9.4 7.0 9.3 9.3 2.9 2.9 9.5 9.9 9.3
0
0.4
[1] 4c3f.a 9.2 9.3 9.3 9.3 9.3 9.3 9.2 5.1 4.2 6.8 9.3 9.3 9.3 9.3 9.3 9.4 9.3 9.3 9.3 9.3 9.3 9.3 9.3 9.3 6.8 9.2 9.2 3.0 2.9 9.4 9.7 9.2 0.4
0
[Binding site backbone RMSD matrix]

Site full-atom RMSD (median 0.6 Å)

Pockets (x) vs pockets (y) colored by RMSD of all site residue atoms

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pocketpocket
≥10 Å
9 Å
8 Å
7 Å
6 Å
5 Å
4 Å
3 Å
2 Å
1 Å
0 Å
1qpc.a
1qpd.a
1qpe.a
1qpj.a
2of2.a
2of4.a
2ofu.a
2ofv.b
2og8.b
2pl0.a
2zm1.a
2zm4.a
2zyb.a
3ac1.a
3ac2.a
3ac3.a
3ac4.a
3ac5.a
3ac8.a
3acj.a
3ack.a
3ad4.a
3ad5.a
3ad6.a
3b2w.a
3bym.a
3byo.a
3bys.a
3byu.a
3kmm.a
3kxz.a
3lck.a
3mpm.a
4c3f.a
[1] 1qpc.a
0
0.7 0.6 1.0 0.5 0.5 0.7 4.8 3.5 11 0.7 0.6 0.7 0.5 0.5 0.6 0.5 0.5 0.8 0.5 0.6 0.5 0.5 0.5 5.5 0.4 0.5 2.5 2.5 0.7 1.3 0.4 9.4 9.3
[1] 1qpd.a 0.7
0
0.8 0.8 0.6 0.6 0.8 4.8 3.6 10 1.0 0.8 0.9 0.8 0.8 1.0 0.9 0.9 1.0 0.9 0.9 0.9 0.9 0.9 5.3 0.7 0.7 2.6 2.5 1.1 1.4 0.9 9.7 9.6
[1] 1qpe.a 0.6 0.8
0
1.1 0.7 0.7 0.9 4.9 3.6 11 0.8 0.7 0.8 0.7 0.7 0.7 0.7 0.6 0.8 0.7 0.7 0.7 0.7 0.7 5.6 0.7 0.7 2.6 2.5 0.8 1.3 0.6 9.5 9.4
[1] 1qpj.a 1.0 0.8 1.1
0
1.0 1.0 1.1 4.8 3.6 11 1.1 1.0 1.1 1.0 1.0 1.1 1.1 1.0 1.3 1.0 1.0 1.1 1.1 1.1 5.5 0.9 1.1 2.6 2.5 1.0 1.4 1.1 9.5 9.4
[1] 2of2.a 0.5 0.6 0.7 1.0
0
0.2 0.7 4.8 3.5 11 0.6 0.7 0.7 0.6 0.5 0.6 0.6 0.5 0.8 0.6 0.6 0.6 0.6 0.6 5.6 0.4 0.5 2.6 2.5 0.7 1.2 0.5 9.5 9.4
[1] 2of4.a 0.5 0.6 0.7 1.0 0.2
0
0.6 4.8 3.5 11 0.6 0.6 0.7 0.6 0.5 0.6 0.6 0.5 0.8 0.6 0.6 0.6 0.5 0.6 5.6 0.3 0.5 2.5 2.5 0.7 1.2 0.5 9.5 9.4
[1] 2ofu.a 0.7 0.8 0.9 1.1 0.7 0.6
0
4.8 3.5 11 0.7 0.8 0.8 0.6 0.7 0.7 0.7 0.7 0.9 0.7 0.7 0.7 0.7 0.7 5.6 0.6 0.7 2.6 2.5 0.9 1.4 0.8 9.5 9.4
[1] 2ofv.b 4.8 4.8 4.9 4.8 4.8 4.8 4.8
0
1.9 4.7 4.8 4.8 4.8 4.8 4.8 4.8 4.9 4.8 4.9 4.8 4.8 4.8 4.8 4.8 4.3 4.8 4.8 1.8 1.6 4.8 5.1 4.8 4.9 4.9
[1] 2og8.b 3.5 3.6 3.6 3.6 3.5 3.5 3.5 1.9
0
2.1 3.5 3.5 3.5 3.5 3.5 3.5 3.5 3.5 3.6 3.5 3.5 3.5 3.5 3.5 4.0 3.5 3.5 1.4 1.3 3.5 3.8 3.5 4.0 4.0
[1] 2pl0.a 11 10 11 11 11 11 11 4.7 2.1
0
11 11 11 11 11 11 11 11 11 11 11 11 11 11 6.5 11 11 2.0 2.0 11 11 11 7.5 7.5
[1] 2zm1.a 0.7 1.0 0.8 1.1 0.6 0.6 0.7 4.8 3.5 11
0
0.9 0.9 0.9 0.9 0.9 1.0 0.8 1.0 0.8 1.0 1.0 0.9 1.0 5.6 0.7 0.7 2.6 2.5 0.9 1.4 1.0 9.9 9.8
[1] 2zm4.a 0.6 0.8 0.7 1.0 0.7 0.6 0.8 4.8 3.5 11 0.9
0
0.8 0.6 0.6 0.7 0.6 0.7 0.9 0.6 0.6 0.6 0.6 0.6 5.6 0.6 0.7 2.6 2.5 1.0 1.5 0.6 10 10
[1] 2zyb.a 0.7 0.9 0.8 1.1 0.7 0.7 0.8 4.8 3.5 11 0.9 0.8
0
0.8 0.8 1.0 0.9 0.8 1.0 0.8 0.9 0.9 0.9 0.9 5.6 0.7 0.8 2.5 2.5 1.0 1.4 0.8 10 9.9
[1] 3ac1.a 0.5 0.8 0.7 1.0 0.6 0.6 0.6 4.8 3.5 11 0.9 0.6 0.8
0
0.5 0.6 0.4 0.5 0.8 0.4 0.5 0.4 0.3 0.3 5.6 0.5 0.6 2.5 2.5 1.0 1.4 0.4 10 9.8
[1] 3ac2.a 0.5 0.8 0.7 1.0 0.5 0.5 0.7 4.8 3.5 11 0.9 0.6 0.8 0.5
0
0.8 0.6 0.6 0.9 0.6 0.7 0.7 0.6 0.6 5.6 0.5 0.6 2.6 2.5 1.0 1.5 0.6 10 10
[1] 3ac3.a 0.6 1.0 0.7 1.1 0.6 0.6 0.7 4.8 3.5 11 0.9 0.7 1.0 0.6 0.8
0
0.6 0.5 0.9 0.5 0.6 0.5 0.5 0.6 5.6 0.6 0.6 2.6 2.6 0.9 1.4 0.6 10 9.8
[1] 3ac4.a 0.5 0.9 0.7 1.1 0.6 0.6 0.7 4.9 3.5 11 1.0 0.6 0.9 0.4 0.6 0.6
0
0.5 0.8 0.5 0.5 0.4 0.4 0.3 5.6 0.6 0.5 2.6 2.6 0.9 1.5 0.4 10 9.8
[1] 3ac5.a 0.5 0.9 0.6 1.0 0.5 0.5 0.7 4.8 3.5 11 0.8 0.7 0.8 0.5 0.6 0.5 0.5
0
0.7 0.5 0.5 0.5 0.5 0.4 5.6 0.5 0.6 2.6 2.5 0.8 1.3 0.5 10 9.8
[1] 3ac8.a 0.8 1.0 0.8 1.3 0.8 0.8 0.9 4.9 3.6 11 1.0 0.9 1.0 0.8 0.9 0.9 0.8 0.7
0
0.7 0.9 0.8 0.8 0.8 5.6 0.8 0.8 2.6 2.6 1.1 1.5 0.7 9.8 9.7
[1] 3acj.a 0.5 0.9 0.7 1.0 0.6 0.6 0.7 4.8 3.5 11 0.8 0.6 0.8 0.4 0.6 0.5 0.5 0.5 0.7
0
0.5 0.4 0.3 0.4 5.6 0.5 0.6 2.6 2.5 0.9 1.4 0.4 10 9.8
[1] 3ack.a 0.6 0.9 0.7 1.0 0.6 0.6 0.7 4.8 3.5 11 1.0 0.6 0.9 0.5 0.7 0.6 0.5 0.5 0.9 0.5
0
0.5 0.5 0.5 5.6 0.6 0.6 2.6 2.6 0.9 1.5 0.5 10 9.9
[1] 3ad4.a 0.5 0.9 0.7 1.1 0.6 0.6 0.7 4.8 3.5 11 1.0 0.6 0.9 0.4 0.7 0.5 0.4 0.5 0.8 0.4 0.5
0
0.4 0.3 5.6 0.5 0.6 2.6 2.5 1.0 1.5 0.4 10 9.8
[1] 3ad5.a 0.5 0.9 0.7 1.1 0.6 0.5 0.7 4.8 3.5 11 0.9 0.6 0.9 0.3 0.6 0.5 0.4 0.5 0.8 0.3 0.5 0.4
0
0.3 5.6 0.5 0.5 2.6 2.5 0.9 1.5 0.3 10 9.8
[1] 3ad6.a 0.5 0.9 0.7 1.1 0.6 0.6 0.7 4.8 3.5 11 1.0 0.6 0.9 0.3 0.6 0.6 0.3 0.4 0.8 0.4 0.5 0.3 0.3
0
5.6 0.5 0.5 2.6 2.5 1.0 1.5 0.3 10 9.8
[1] 3b2w.a 5.5 5.3 5.6 5.5 5.6 5.6 5.6 4.3 4.0 6.5 5.6 5.6 5.6 5.6 5.6 5.6 5.6 5.6 5.6 5.6 5.6 5.6 5.6 5.6
0
5.5 5.6 3.3 3.2 5.6 5.9 5.5 6.7 6.6
[1] 3bym.a 0.4 0.7 0.7 0.9 0.4 0.3 0.6 4.8 3.5 11 0.7 0.6 0.7 0.5 0.5 0.6 0.6 0.5 0.8 0.5 0.6 0.5 0.5 0.5 5.5
0
0.5 2.5 2.5 0.7 1.3 0.4 9.4 9.3
[1] 3byo.a 0.5 0.7 0.7 1.1 0.5 0.5 0.7 4.8 3.5 11 0.7 0.7 0.8 0.6 0.6 0.6 0.5 0.6 0.8 0.6 0.6 0.6 0.5 0.5 5.6 0.5
0
2.6 2.6 0.8 1.5 0.5 9.4 9.3
[1] 3bys.a 2.5 2.6 2.6 2.6 2.6 2.5 2.6 1.8 1.4 2.0 2.6 2.6 2.5 2.5 2.6 2.6 2.6 2.6 2.6 2.6 2.6 2.6 2.6 2.6 3.3 2.5 2.6
0
0.8 2.5 2.8 2.5 3.2 3.2
[1] 3byu.a 2.5 2.5 2.5 2.5 2.5 2.5 2.5 1.6 1.3 2.0 2.5 2.5 2.5 2.5 2.5 2.6 2.6 2.5 2.6 2.5 2.6 2.5 2.5 2.5 3.2 2.5 2.6 0.8
0
2.5 2.8 2.5 3.1 3.1
[1] 3kmm.a 0.7 1.1 0.8 1.0 0.7 0.7 0.9 4.8 3.5 11 0.9 1.0 1.0 1.0 1.0 0.9 0.9 0.8 1.1 0.9 0.9 1.0 0.9 1.0 5.6 0.7 0.8 2.5 2.5
0
1.4 0.9 10 9.8
[1] 3kxz.a 1.3 1.4 1.3 1.4 1.2 1.2 1.4 5.1 3.8 11 1.4 1.5 1.4 1.4 1.5 1.4 1.5 1.3 1.5 1.4 1.5 1.5 1.5 1.5 5.9 1.3 1.5 2.8 2.8 1.4
0
1.5 10 10
[1] 3lck.a 0.4 0.9 0.6 1.1 0.5 0.5 0.8 4.8 3.5 11 1.0 0.6 0.8 0.4 0.6 0.6 0.4 0.5 0.7 0.4 0.5 0.4 0.3 0.3 5.5 0.4 0.5 2.5 2.5 0.9 1.5
0
9.9 9.8
[1] 3mpm.a 9.4 9.7 9.5 9.5 9.5 9.5 9.5 4.9 4.0 7.5 9.9 10 10 10 10 10 10 10 9.8 10 10 10 10 10 6.7 9.4 9.4 3.2 3.1 10 10 9.9
0
0.6
[1] 4c3f.a 9.3 9.6 9.4 9.4 9.4 9.4 9.4 4.9 4.0 7.5 9.8 10 9.9 9.8 10 9.8 9.8 9.8 9.7 9.8 9.9 9.8 9.8 9.8 6.6 9.3 9.3 3.2 3.1 9.8 10 9.8 0.6
0
[Binding site full-atom RMSD matrix]







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[ENTRY 2D visualization]

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