DPRE1_MYCTU_2_461

FAD-dependent decaprenylphosphoryl-beta-D-ribofuranose 2-oxidase

ActiveICM:

L C E

Composition of the binding pockets

Protein chains monomer[show domain annotation]
 • A1 (DPRE1_MYCTU):D: FAD-binding PCMH-type (60,117,132:134)
R: Substrate binding (385:387)
228,230,314,317,320,321,324,325,334,336,363:365,367,418
60,117,132:134,228,230,314,317,320,321,324,325,334,336,363:365,367,385:387,418
Cofactors (cF):fad

Full PDB list

4fdn,4fdo,4fdp,4feh,4ff6,4kw5,4ncr,4p8c,4p8h,4p8k,4p8l,4p8m,4p8n,4p8p,4p8t,4p8y,4pfa,4pfd (redundant pocketome entry)

Contact map

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ligand
A1 cF
Y
6
0
G
1
1
7
H
1
3
2
G
1
3
3
K
1
3
4
S
2
2
8
W
2
3
0
Y
3
1
4
L
3
1
7
F
3
2
0
G
3
2
1
N
3
2
4
R
3
2
5
Q
3
3
4
Q
3
3
6
L
3
6
3
N
3
6
4
V
3
6
5
K
3
6
7
N
3
8
5
I
3
8
6
C
3
8
7
K
4
1
8
[1]4ncr.b 26j 30 . . . . . . . . - - - - - . . . . . . . . * . fad
[1]4pfd.a 2r2 29 . . . . . . . . . - - - - . . . . . . . . . . fad
[2]4p8l.a 36c 26 . . . . . . . . . . . . . . . . . . . . . . . fad
[1]4pfa.b n77 26 . . . . . . . . - - - - - . . . . . . . . * . fad
[1]4p8h.a o95 28 . . . . . . . . - - - - - . . . . . . . . * . fad
[2]4p8t.a r26 27 . . . . . . . . . . . . . . . . . . . . . . . fad
[2]4p8n.a r57 28 . . . . . . . . . . . . . . . . . . . . . . . fad
[1]4p8m.a r58 28 . . . . . . . . . - - - - . . . . . . . . . . fad
[2]4p8p.a rg2 26 . . . . . . . . . . . - - . . . . . . . . . . fad
[2]4p8c.a y22 29 . . . . . . . . . . . - - . . . . . . . . . . fad
[1]4kw5.a 1w6 25 . . . . . . . . - - - - - . . . . . . . . . . fad
[3]4fdo.a 0t5 24 . . . . . . . . . . . . . . . . . . . . . . . fad
[1]4fdn.a 0t4 23 . . . . . . . . - - - . . . . . . . . . . * . fad
[1]4p8y.a 38c 27 . . . . . . . . . . . . . . . . . . . . . . . fad
[2]4feh.a none . . . . . . . . - - - . . . . . . . . . . . . fad

Legend

B backbone contact  S side chain contact  F BB + SCh
.
 no contact C covalent bond
X X X X X  clash
X mutation to X * complex cases - deletion
M contact with cofactors/metals (if any)
[icb] Download ICM binary file
[xml] Download XML file
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