DODEC_HALS3_1_67

Dodecin [Dodecin family]

ActiveICM:

L C E

Composition of the binding pockets

Protein chains homotetramer
 • A1 (DODEC_HALS3):3,33,35:38,633,33,35:38,63
 • A2 (DODEC_HALS3):43:48,5543:48,55
 • A3 (DODEC_HALS3):45,48,5545,48,55
 • A4 (DODEC_HALS3):3,363,36
Metals (Me):Mg/Na

Full PDB list

1mog,2cc6,2cc7,2cc8,2cc9,2ccb,2ccc,2cie,2cif,2cjc,2vkf,2vkg,2vx9,4b2h,4b2j,4b2k,4b2m (redundant pocketome entry)

Contact map

[download in TSV format]
   
PDB.ch
   
ligand
A1 A2 A3 A4 Me
F
3
N
3
3
V
3
5
W
3
6
A
3
7
E
3
8
E
6
3
G
4
3
V
4
4
E
4
5
I
4
6
G
4
7
A
4
8
Q
5
5
E
4
5
A
4
8
Q
5
5
F
3
W
3
6
[2]2vkg.a cf4 26 . . . . . . . . . A . . . . A . . - - Mg
[2]4b2h.a c3f 25 . . . . . . . . . A . . . . A . . - - Na
[1]2ccc.a lfn 19 . . . . . . . . . . . . . . . . . . . Mg
[2]2vkf.a cf2 42 . . . . . . . . . A . . . . A . . - - Mg
[1]1mog.a rbf 27 . . . . . . . . . . . . . . . . . . . Mg
[1]2cc9.a none . . . . . . . . . . . . . . . . . . . Mg
[1]2cc7.a lum 18 . . . . . . . . . . . . . . . . . . . Mg
[1]2vx9.a rbf 27 . . . . . . . . . A . . . . A . . . . Na
[1]2cjc.a fad 38 . . . . . . . . . . . . . . . . . . . Mg
[1]4b2j.a rbf 18 . . . * . . . . . . . . . . . . . . * Mg
[1]4b2k.a rbf 18 . . . * . . . . . . . . . . . . . . * Mg
[1]4b2m.a rbf 18 . . . * . . . . . . . . . . . . . . * Mg

Legend

B backbone contact  S side chain contact  F BB + SCh
.
 no contact C covalent bond
X X X X X  clash
X mutation to X * complex cases - deletion
M contact with cofactors/metals (if any)
[icb] Download ICM binary file
[xml] Download XML file
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