DHGB_ACICA_25_478

Quinoprotein glucose dehydrogenase B [PQQ oxidoreductase GdhB family]

ActiveICM:

L C E

Composition of the binding pockets

Protein chains monomer[show domain annotation]
 • A1 (DHGB_ACICA):R: PQQ (252,253)
R: PQQ (430,432)
100,168,255,270:272,367,370,372,374,400,401
100,168,252,253,255,270:272,367,370,372,374,400,401,430,432
Metals (Me):Ca

Full PDB list

1c9u,1cq1,1cru,1qbi (redundant pocketome entry)

Contact map

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ligand
A1 Me
Q
1
0
0
H
1
6
8
R
2
5
2
N
2
5
3
Q
2
5
5
Q
2
7
0
G
2
7
1
P
2
7
2
Y
3
6
7
W
3
7
0
T
3
7
2
A
3
7
4
L
4
0
0
K
4
0
1
R
4
3
0
R
4
3
2
[1]1qbi.a none . . . . . . . . - . . . . . . . Ca
[1]1cq1.b pqq 24 . . . . . . . . . . . . . . . . Ca
[1]1cru.a pqq.hdn 27 . . . . . . . . . . . . . . . . Ca

Legend

B backbone contact  S side chain contact  F BB + SCh
.
 no contact C covalent bond
X X X X X  clash
X mutation to X * complex cases - deletion
M contact with cofactors/metals (if any)
[icb] Download ICM binary file
[xml] Download XML file
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