DESV_STRVZ_1_379

dTDP-3-amino-3,4,6-trideoxy-alpha-D-glucose transaminase [DegT/dnrJ/eryC1 family]

ActiveICM:

L C E

Composition of the binding pockets

Protein chains homodimer[show domain annotation]
 • A1 (DESV_STRVZ):R: Pyridoxal phosphate binding (188,190,193)
66:68,93,95,138,164,166,167,318
66:68,93,95,138,164,166,167,188,190,193,318
 • A2 (DESV_STRVZ):R: Pyridoxal phosphate binding (235,237)
221,226,227
221,226,227,235,237
Metals (Me):Na

Full PDB list

2oga,2oge

Contact map

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ligand
A1 A2 Me
S
6
6
G
6
7
M
6
8
Y
9
3
A
9
5
V
1
3
8
D
1
6
4
A
1
6
6
Q
1
6
7
S
1
8
8
Y
1
9
0
K
1
9
3
Y
3
1
8
Y
2
2
1
K
2
2
6
Y
2
2
7
N
2
3
5
R
2
3
7
[1]2oga.b pgu 25 . . . . . . . . . . . . . . . . . . Na
[1]2oge.a plp 15 . . . . . . . . . . . * . . . . . . Na

Legend

B backbone contact  S side chain contact  F BB + SCh
.
 no contact C covalent bond
X X X X X  clash
X mutation to X * complex cases - deletion
M contact with cofactors/metals (if any)
[icb] Download ICM binary file
[xml] Download XML file
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