DEF_STRPN_1_203

Peptide deformylase [Polypeptide deformylase family]

ActiveICM:

L C E

Composition of the binding pockets

Protein chains monomer
 • A1 (DEF_STRPN):57,68:73,77,90,124,126:131,166,169,170,173,174,17757,68:73,77,90,124,126:131,166,169,170,173,174,177
Metals (Me):Fe/Ni

Full PDB list

1lm6,2ai7,2aia,2aie,3str,3svj,3sw8,4eox

Contact map

[download in TSV format]
   
PDB.ch
   
ligand
A1 Me
Q
5
7
R
6
8
G
6
9
G
7
0
V
7
1
G
7
2
L
7
3
Q
7
7
P
9
0
L
1
2
4
E
1
2
6
G
1
2
7
E
1
2
8
G
1
2
9
C
1
3
0
L
1
3
1
Y
1
6
6
I
1
6
9
V
1
7
0
H
1
7
3
E
1
7
4
H
1
7
7
[1]4eox.p 0s5 30 . . . . . . . . . . . . . . . . . . . . . . Ni
[1]2aia.a sb8 21 . . . . . . . . . . . . . . . . . . . . . . Ni
[1]3svj.p 4li 40 . . . . . . . . . . . . . . * . . . . . . . Ni
[1]3sw8.p 5li 17 . . . . . . . . . . . . . . . . . . . . . . Ni
[1]3str.p 3li 44 . . . . . . . . . . . . . . . . . . . . . . Ni
[1]2aie.p sb9 14 . . . . . . . . . . . . . . . . . . . . . . Ni
[1]2ai7.a sb7 13 . . . . . . . . . . . . . . . . . . . . . . Ni
[1]1lm6.a none . . . . . . . . . . . . . . * . . . . . . . Fe

Legend

B backbone contact  S side chain contact  F BB + SCh
.
 no contact C covalent bond
X X X X X  clash
X mutation to X * complex cases - deletion
M contact with cofactors/metals (if any)
[icb] Download ICM binary file
[xml] Download XML file
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