DEF1A_ARATH_78_268

Peptide deformylase 1A, chloroplastic/mitochondrial [Polypeptide deformylase family]

ActiveICM:

L C E

Composition of the binding pockets

Protein chains monomer[show domain annotation]
 • A1 (DEF1A_ARATH):R: Substrate binding (123:126)
R: Dimerization (195)
131,147,161,186:189,223,226,227,230,231,234
123:126,131,147,161,186:189,195,223,226,227,230,231,234
Metals (Me):Zn

Full PDB list

1zxz,1zy0,1zy1,4je6,4je7,4je8 (redundant pocketome entry)

Contact map

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ligand
A1 Me
P
1
2
3
G
1
2
4
V
1
2
5
G
1
2
6
Q
1
3
1
Y
1
4
7
R
1
6
1
E
1
8
6
G
1
8
7
C
1
8
8
L
1
8
9
R
1
9
5
W
2
2
3
R
2
2
6
I
2
2
7
H
2
3
0
E
2
3
1
H
2
3
4
[1]4je7.a bb2 27 . C . . . . . . . . E . . . . . . . Zn
[1]1zxz.b none . . . . . . . . . . . . . . . . . . Zn
[1]1zy1.a MAS 20 . . . . . . . . . . . . . . . . . . Zn
[1]4je6.a none . C . . . . . . . . E . . . . . . . Zn
[1]4je8.a MAS 19 . C . . . . . . . . E . . . . . . . Zn

Legend

B backbone contact  S side chain contact  F BB + SCh
.
 no contact C covalent bond
X X X X X  clash
X mutation to X * complex cases - deletion
M contact with cofactors/metals (if any)
[icb] Download ICM binary file
[xml] Download XML file
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