DBP5_YEAST_295_482

ATP-dependent RNA helicase DBP5 [DEAD box helicase family. DDX19/DBP5 subfamily]

ActiveICM:

L C E

Composition of the binding pockets

Protein chains monomer[show domain annotation]
 • A1 (DBP5_YEAST):D: Helicase ATP-binding (139:146,184)
D: Helicase C-terminal (395,429,430)
94,110,112,114,119
94,110,112,114,119,139:146,184,395,429,430

Full PDB list

3gfp,3peu,3pev,3pew,3pey,3rrm,5elx (redundant pocketome entry)

Contact map

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ligand
A1
F
9
4
M
1
1
0
F
1
1
2
K
1
1
4
Q
1
1
9
Q
1
3
9
S
1
4
0
G
1
4
1
T
1
4
2
G
1
4
3
K
1
4
4
T
1
4
5
A
1
4
6
E
1
8
4
D
3
9
5
R
4
2
9
F
4
3
0
[1]5elx.a m2a,mg 38 . . . . . . . . . . . . . . . . .
[1]3pew.a adp,mg 28 . . . . . . . . . . . . . . . . .
[1]3gfp.a none - - - - - - - - - - - - - - . . .
[2]3rrm.a adp 27 - . . . . . . . . . . . . . . . .

Legend

B backbone contact  S side chain contact  F BB + SCh
.
 no contact C covalent bond
X X X X X  clash
X mutation to X * complex cases - deletion
M contact with cofactors/metals (if any)
[icb] Download ICM binary file
[xml] Download XML file
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