DAPD_YERPE_1_270

2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [Transferase hexapeptide repeat family]

ActiveICM:

L C E

Composition of the binding pockets

Protein chains homodimer
 • A1 (DAPD_YERPE):104,124,139,141,270104,124,139,141,270
 • A2 (DAPD_YERPE):67,112,129,148,166:16967,112,129,148,166:169

Full PDB list

1kgq,1kgt,1tdt,2tdt,3gos,3tdt (redundant pocketome entry)

Contact map

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ligand
A1 A2
R
1
0
4
M
1
2
4
M
1
3
9
D
1
4
1
L
2
7
0
F
6
7
R
1
1
2
N
1
2
9
S
1
4
8
G
1
6
6
V
1
6
7
L
1
6
8
E
1
6
9
[1]3tdt.a 26p 13 . . . . . . . . . . . . .
[1]1kgt.a pml 11 . . . . . . . . . . . . .
[1]2tdt.a npi 12 . . . . . . . . . . . . .
[1]3gos.b none . . . . . . . . . . . . .

Legend

B backbone contact  S side chain contact  F BB + SCh
.
 no contact C covalent bond
X X X X X  clash
X mutation to X * complex cases - deletion
M contact with cofactors/metals (if any)
[icb] Download ICM binary file
[xml] Download XML file
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