If you see this message after the page is completely loaded, then JavaScript is not supported or disabled in your browser. Please consider enabling JavaScript for this site.

CP51_CANAL_43_528

Lanosterol 14-alpha demethylase [Cytochrome P450 family]

Composition of the binding site

Protein chains monomer
A1 (CP51_CANAL):58, 61, 62, 64:66, 118, 121, 122, 126, 131, 132, 228, 230, 233, 303, 304, 307, 311, 376:378, 380, 505:50858, 61, 62, 64:66, 118, 121, 122, 126, 131, 132, 228, 230, 233, 303, 304, 307, 311, 376:378, 380, 505:508
Cofactors (cF):hem
Metals (Me):Fe

Full PDB list

5fsa, 5tz1, 5v5z

Pocket contact map

[download in TSV format]
   
PDB.ch
   
ligand
A1 cF Me
F
5
8
A
6
1
Y
6
4
G
6
5
Y
1
1
8
L
1
2
1
T
1
2
2
F
1
2
6
I
1
3
1
Y
1
3
2
F
2
2
8
P
2
3
0
F
2
3
3
G
3
0
3
I
3
0
4
G
3
0
7
T
3
1
1
L
3
7
6
H
3
7
7
S
3
7
8
F
3
8
0
Y
5
0
5
S
5
0
6
S
5
0
7
M
5
0
8
[1]5fsa.a x2n51 . . . . . . . . . . . . . . . . . . . . . . . . . hem Fe
[1]5tz1.a vt137 . . . . . . . . . . . . . . . . . . . . . . . . . hem Fe
[1]5v5z.a 1yn49 . . . . . . . . . . . . . . . . . . . . . . . . . hem Fe

Legend

B backbone contact  S side chain contact  F BB + SCh
.
 no contact C covalent bond
X mutation to X * complex cases - deletion
M contact with cofactors/metals (if any)

Site contact map

[download in TSV format]
   
PDB.ch
A1 cF Me
F
5
8
A
6
1
A
6
2
Y
6
4
G
6
5
Q
6
6
Y
1
1
8
L
1
2
1
T
1
2
2
F
1
2
6
I
1
3
1
Y
1
3
2
F
2
2
8
P
2
3
0
F
2
3
3
G
3
0
3
I
3
0
4
G
3
0
7
T
3
1
1
L
3
7
6
H
3
7
7
S
3
7
8
F
3
8
0
Y
5
0
5
S
5
0
6
S
5
0
7
M
5
0
8
[1]5fsa.a . . . . . . . . . . . . . . . . . . . . . . . . . . . hem Fe
[1]5tz1.a . . . . . . . . . . . . . . . . . . . . . . . . . . . hem Fe
[1]5v5z.a . . . . . . . . . . . . . . . . . . . . . . . . . . . hem Fe

Legend

B backbone contact  S side chain contact  F BB + SCh
.
 no contact C covalent bond
X X X X X  clash
X mutation to X * complex cases - deletion
M contact with cofactors/metals (if any)

Pocket-ligand steric compatibility

Ligands (x) vs pockets (y) colored by number of steric clashes

zoom: [−] [+]; [view as image]; [download as text]

pocketligand
≥10
9
8
7
6
5
4
3
2
1
0
5fsa.a:x2n
5tz1.a:vt1
5v5z.a:1yn
[1] 5fsa.a
0
0 0.1
[1] 5tz1.a 0
0
0.2
[1] 5v5z.a 0.2 0.1
0
[Pocket-ligand steric clashes matrix]

Pocket clash dissimilarity (1 cluster)

Pockets (x) vs pockets (y) colored by ligand clash profile difference

zoom: [−] [+]; [view as image]; [download as text]

pocketpocket
≥1.
.9
.8
.7
.6
.5
.4
.3
.2
.1
.0
5fsa.a
5tz1.a
5v5z.a
[1] 5fsa.a
0
.01 .01
[1] 5tz1.a .01
0
.02
[1] 5v5z.a .01 .02
0
[Pocket clash dissimilarity matrix]

Site backbone RMSD (median 0.9 Å)

Pockets (x) vs pockets (y) colored by RMSD of site residue backbone atoms

zoom: [−] [+]; [view as image]; [download as text]

pocketpocket
≥10 Å
9 Å
8 Å
7 Å
6 Å
5 Å
4 Å
3 Å
2 Å
1 Å
0 Å
5fsa.a
5tz1.a
5v5z.a
[1] 5fsa.a
0
0.6 0.9
[1] 5tz1.a 0.6
0
0.8
[1] 5v5z.a 0.9 0.8
0
[Binding site backbone RMSD matrix]

Site full-atom RMSD (median 0.6 Å)

Pockets (x) vs pockets (y) colored by RMSD of all site residue atoms

zoom: [−] [+]; [view as image]; [download as text]

pocketpocket
≥10 Å
9 Å
8 Å
7 Å
6 Å
5 Å
4 Å
3 Å
2 Å
1 Å
0 Å
5fsa.a
5tz1.a
5v5z.a
[1] 5fsa.a
0
0.9 1.2
[1] 5tz1.a 0.9
0
1.1
[1] 5v5z.a 1.2 1.1
0
[Binding site full-atom RMSD matrix]







[show 3D visualization]

[ENTRY 2D visualization]

L C X E | Background Color: | Anaglyph Stereo:

loading...