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CAH14_MOUSE_18_278

Carbonic anhydrase 14 [Alpha-carbonic anhydrase family]

Composition of the binding site

Protein chains monomer [domain annotation]
A1 (CAH14_MOUSE):D: Alpha-carbonic anhydrase (107, 109, 111, 135, 137, 147, 216:218, 227)
R: Substrate binding (217, 218)
107, 109, 111, 135, 137, 147, 216:218, 227
Metals (Me):Zn

Full PDB list

1rj5, 1rj6

Pocket contact map

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PDB.ch
   
ligand
A1 Me
Q
1
0
7
H
1
0
9
H
1
1
1
H
1
3
5
V
1
3
7
L
1
4
7
L
2
1
6
T
2
1
7
T
2
1
8
W
2
2
7
[1]1rj5.b none . . . . . . . . . . Zn
[1]1rj6.b azm13 . . . . . . . . . . Zn

Legend

B backbone contact  S side chain contact  F BB + SCh
.
 no contact C covalent bond
X mutation to X * complex cases - deletion
M contact with cofactors/metals (if any)

Site contact map

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PDB.ch
A1 Me
Q
1
0
7
H
1
0
9
H
1
1
1
H
1
3
5
V
1
3
7
L
1
4
7
L
2
1
6
T
2
1
7
T
2
1
8
W
2
2
7
[1]1rj5.b . . . . . . . . . . Zn
[1]1rj6.b . . . . . . . . . . Zn

Legend

B backbone contact  S side chain contact  F BB + SCh
.
 no contact C covalent bond
X X X X X  clash
X mutation to X * complex cases - deletion
M contact with cofactors/metals (if any)

Pocket-ligand steric compatibility

Ligands (x) vs pockets (y) colored by number of steric clashes

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pocketligand
≥10
9
8
7
6
5
4
3
2
1
0
1rj5.b is apo
1rj6.b:azm
[1] 1rj5.b
-
0.1
[1] 1rj6.b -
0.1
[Pocket-ligand steric clashes matrix]

Pocket clash dissimilarity (1 cluster)

Pockets (x) vs pockets (y) colored by ligand clash profile difference

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pocketpocket
≥1.
.9
.8
.7
.6
.5
.4
.3
.2
.1
.0
1rj5.b
1rj6.b
[1] 1rj5.b
0
0
[1] 1rj6.b 0
0
[Pocket clash dissimilarity matrix]

Site backbone RMSD (median 0.2 Å)

Pockets (x) vs pockets (y) colored by RMSD of site residue backbone atoms

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pocketpocket
≥10 Å
9 Å
8 Å
7 Å
6 Å
5 Å
4 Å
3 Å
2 Å
1 Å
0 Å
1rj5.b
1rj6.b
[1] 1rj5.b
0
0.2
[1] 1rj6.b 0.2
0
[Binding site backbone RMSD matrix]

Site full-atom RMSD (median 0.1 Å)

Pockets (x) vs pockets (y) colored by RMSD of all site residue atoms

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pocketpocket
≥10 Å
9 Å
8 Å
7 Å
6 Å
5 Å
4 Å
3 Å
2 Å
1 Å
0 Å
1rj5.b
1rj6.b
[1] 1rj5.b
0
0.3
[1] 1rj6.b 0.3
0
[Binding site full-atom RMSD matrix]







[show 3D visualization]

[ENTRY 2D visualization]

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