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BRD2_HUMAN_69_198

Bromodomain-containing protein 2

Composition of the binding site

Protein chains monomer [domain annotation]
A1 (BRD2_HUMAN):D: Bromo 1 (97:99, 101, 103, 107:113, 115, 116, 152:162)
165
97:99, 101, 103, 107:113, 115, 116, 152:162, 165

Full PDB list

1x0j, 2dvq, 2dvr, 2dvs, 2ydw, 2yek, 3aqa, 4a9e, 4a9f, 4a9h, 4a9i, 4a9j, 4a9m, 4a9n, 4a9o, 4akn, 4alg, 4alh, 4uyf, 4uyh, 5hel, 5hem, 5hen

Pocket contact map

[download in TSV format]
   
PDB.ch
   
ligand
A1
W
9
7
P
9
8
F
9
9
V
1
0
3
K
1
0
7
L
1
0
8
L
1
1
0
D
1
1
2
Y
1
1
3
I
1
1
6
C
1
5
2
Y
1
5
3
I
1
5
4
Y
1
5
5
N
1
5
6
K
1
5
7
P
1
5
8
T
1
5
9
D
1
6
0
D
1
6
1
I
1
6
2
M
1
6
5
[1]1x0j.b dtt8 . . . . . . . . . . . . . . . . . . . . . *
[1]2dvq.b KGGKGLGalyGGA,KGLGalyGGA109 . . . . . . . . . . . . . . . . . . . . . *
[1]2dvr.b GGKGLGalyGGA,KGLGalyGGA104 . . . . . . . . . . . . . . . . . . . . . *
[1]2dvs.b aly12 . . . . . . . . . . . . . . . . . . . . . *
[1]2ydw.a wsh32 . . . . . . . . . . . . . . . . . . . . . .
[1]2yek.b eam30 . . . . . . . . . . . . . . . . . . . . . .
[1]3aqa.a byh23 . . . . . . . . . . . . . . . . . . . . . *
[1]3aqa.b none . . . . . . . . . . . . . . . . . . . . . *
[1]4a9e.a 3pf12 . . . . . . . . . . . . . . . . . . . . . .
[1]4a9f.a mb37 . . . . . . . . . . . . . . . . . . . . . .
[1]4a9h.a tvp14 . . . . . . . . . . . . . . . . . . . . . .
[1]4a9i.a p9i18 . . . . . . . . . . . . . . . . . . . . . .
[1]4a9j.a tyl11 . . . . . . . . . . . . . . . . . . . . . .
[1]4a9m.a p9m23 . . . . . . . . . . . . . . . . . . . . . .
[1]4a9n.a a9n21 . . . . . . . . . . . . . . . . . . . . . .
[1]4a9o.a a9o14 . . . . . . . . . . . . . . . . . . . . . .
[1]4akn.a s5b31 . . . . . . . . . . . . . . . . . . . . . .
[1]4alg.a 1gh31 . . . . . . . . . . . . . . . . . . . . . .
[1]4alh.a a9p13 . . . . . . . . . . . . . . . . . . . . . .
[1]4uyf.a 73b31 . . . . . . . . . . . . . . . . . . . . . .
[1]4uyh.a 9s334 . . . . . . . . . . . . . . . . . . . . . .
[1]5hel.a none . . . . . . . . . . . H . . . . . . . . . .
[1]5hem.a none . . . . . . . . . . . . . . . . . . . Y . .
[1]5hen.a none . . . . . . . . . . . . . . . . . . . . . .

Legend

B backbone contact  S side chain contact  F BB + SCh
.
 no contact C covalent bond
X mutation to X * complex cases - deletion
M contact with cofactors/metals (if any)

Site contact map

[download in TSV format]
   
PDB.ch
A1
W
9
7
P
9
8
F
9
9
Q
1
0
1
V
1
0
3
K
1
0
7
L
1
0
8
G
1
0
9
L
1
1
0
P
1
1
1
D
1
1
2
Y
1
1
3
K
1
1
5
I
1
1
6
C
1
5
2
Y
1
5
3
I
1
5
4
Y
1
5
5
N
1
5
6
K
1
5
7
P
1
5
8
T
1
5
9
D
1
6
0
D
1
6
1
I
1
6
2
M
1
6
5
[1]1x0j.b . . . . . . . . . . . . . . . . . . . . . . . . . *
[1]2dvq.b . . . . . . . . . . . . . . . . . . . . . . . . . *
[1]2dvr.b . . . . . . . . . . . . . . . . . . . . . . . . . *
[1]2dvs.b . . . . . . . . . . . . . . . . . . . . . . . . . *
[1]2ydw.a . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]2yek.b * . . . . . . . . . . . . . . . . . . . . . . . . .
[1]3aqa.a . . . . . . . . . . . . . . . . . . . * . . . . . *
[1]3aqa.b . . . . . . . . . . . . . . . . . . . . . . . . . *
[1]4a9e.a . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]4a9f.a . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]4a9h.a . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]4a9i.a . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]4a9j.a . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]4a9m.a . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]4a9n.a . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]4a9o.a . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]4akn.a . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]4alg.a . . . . . . . . . * . . . . . . . . . . . . . . . .
[1]4alh.a . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]4uyf.a . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]4uyh.a . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]5hel.a . . . . . . . . . . . . . . . H . . . . . . . . . .
[1]5hem.a . . . . . . . . . * . . . . . . . . . . . . . Y . .
[1]5hen.a . . . . . . . . . . . . . . . . . . . . . . . . . .

Legend

B backbone contact  S side chain contact  F BB + SCh
.
 no contact C covalent bond
X X X X X  clash
X mutation to X * complex cases - deletion
M contact with cofactors/metals (if any)

Pocket-ligand steric compatibility

Ligands (x) vs pockets (y) colored by number of steric clashes

zoom: [−] [+]; [view as image]; [download as text]

pocketligand
≥10
9
8
7
6
5
4
3
2
1
0
1x0j.b:dtt
2dvq.b:KGGKGLGalyGGA,KGLGalyGGA
2dvr.b:GGKGLGalyGGA,KGLGalyGGA
2dvs.b:aly
2ydw.a:wsh
2yek.b:eam
3aqa.a:byh
3aqa.b is apo
4a9e.a:3pf
4a9f.a:mb3
4a9h.a:tvp
4a9i.a:p9i
4a9j.a:tyl
4a9m.a:p9m
4a9n.a:a9n
4a9o.a:a9o
4akn.a:s5b
4alg.a:1gh
4alh.a:a9p
4uyf.a:73b
4uyh.a:9s3
5hel.a is apo
5hem.a is apo
5hen.a is apo
[1] 1x0j.b
0.1
0.3 0.3 0.1 0.1 0.2 0.7 - 0.1 0.1 0.1 0.2 0.1 0.2 0.1 0.2 0.4 0.7 0.1 0.1 0.2 - - -
[1] 2dvq.b 0.3
0.2
0.1 0 0 0.3 0.9 - 0 0 0.1 0.1 0.1 0.1 0 0.1 0.2 0.2 0 0.1 0.2 - - -
[1] 2dvr.b 0.2 0.1
0.1
0 0 0.2 0.9 - 0 0 0.2 0.1 0 0.1 0.1 0.2 0.3 0.2 0.1 0.2 0.2 - - -
[1] 2dvs.b 0.3 0.2 0.1
0
0.1 0.1 0.9 - 0.1 0 0.1 0.3 0 0.2 0.1 0.2 0.4 0.7 0.1 0.1 0.2 - - -
[1] 2ydw.a 0.1 0.5 0.5 0
0
0 1.0 - 0 0 0.1 0.1 0 0.1 0.1 0.2 0.3 0.6 0 0.1 0 - - -
[1] 2yek.b 0.1 0.2 0.3 0.1 0.1
0
1.0 - 0.1 0 0.1 0.1 0 0.6 0.4 0.1 0.7 1.3 0.1 0.2 0.2 - - -
[1] 3aqa.a 0.1 0.8 0.6 0 0 0
0.1
- 0 0 0 0 0 0.1 0 0 0.1 0.2 0 0.1 0.1 - - -
[1] 3aqa.b 0.2 0.3 0.1 0 0 0.2 0.5
-
0 0 0.1 0.1 0 0 0 0.1 0.2 0.5 0 0.2 0.2 - - -
[1] 4a9e.a 0.2 0.4 0.5 0 0.2 0.6 0.7 -
0
0 0.1 0.1 0.2 0.1 0.1 0.3 0.5 0.3 0.1 0.3 0.5 - - -
[1] 4a9f.a 0.2 0.3 0.3 0 0.1 0.3 0.6 - 0
0
0.1 0.1 0 0 0 0.1 0.3 0.4 0 0.1 0.2 - - -
[1] 4a9h.a 0.2 0.3 0.3 0 0.1 0.2 0.9 - 0 0
0
0.1 0 0 0 0.1 0.2 0.3 0 0 0 - - -
[1] 4a9i.a 0.1 0.3 0.2 0 0 0.3 0.4 - 0 0 0.1
0
0 0 0 0.1 0 0.1 0 0 0.1 - - -
[1] 4a9j.a 0.1 0.3 0.3 0.1 0.1 0.3 0.6 - 0.1 0.1 0.2 0.1
0.1
0.2 0.1 0.2 0.3 0.6 0.1 0.2 0.3 - - -
[1] 4a9m.a 0.1 0.4 0.4 0 0 0.1 0.4 - 0 0 0 0 0
0
0 0.1 0 0.1 0 0 0.1 - - -
[1] 4a9n.a 0.1 0.3 0.3 0 0 0.1 0.6 - 0 0 0 0 0 0
0
0.1 0.1 0.1 0 0 0.1 - - -
[1] 4a9o.a 0.1 0.2 0.3 0 0 0 0.6 - 0 0 0 0.1 0 0 0
0
0.2 0.3 0 0.1 0.1 - - -
[1] 4akn.a 0.1 0.3 0.3 0 0.1 0.2 0.5 - 0 0 0 0 0 0 0 0.1
0
0.1 0 0 0.1 - - -
[1] 4alg.a 0.1 1.0 1.3 0 0.4 0.6 0.4 - 0 0 0.1 0 0 0 0 0.1 0
0
0.1 0.1 0.3 - - -
[1] 4alh.a 0.1 0.2 0.2 0 0 0.1 0.6 - 0 0 0 0.1 0 0 0 0.1 0.2 0.3
0
0 0 - - -
[1] 4uyf.a 0.2 0.2 0.2 0 0 0.1 0.5 - 0 0 0 0 0 0.1 0 0.1 0.1 0.5 0
0
0 - - -
[1] 4uyh.a 0.2 0.3 0.3 0 0 0.1 0.6 - 0 0 0.1 0 0 0.1 0.1 0.2 0.3 0.7 0.1 0.1
0.1
- - -
[1] 5hel.a 0.1 0.6 0.6 0.1 0.1 0.2 0.9 - 0.1 0 0.1 0.2 0 0.3 0.4 0.2 0.7 0.7 0.2 0.1 0.2
-
- -
[1] 5hem.a 0 2.0 2.5 0.1 0.1 0.4 0.7 - 0 0 0.1 0.1 0 0 0 0.1 0.1 0.2 0.1 0.1 0.1 -
-
-
[1] 5hen.a 0.1 0.4 0.4 0.1 0.1 0.2 0.6 - 0.1 0.1 0.1 0.1 0.1 0.2 0.1 0.2 0.3 0.7 0.1 0.1 0.2 - -
-
[Pocket-ligand steric clashes matrix]

Pocket clash dissimilarity (1 cluster)

Pockets (x) vs pockets (y) colored by ligand clash profile difference

zoom: [−] [+]; [view as image]; [download as text]

pocketpocket
≥1.
.9
.8
.7
.6
.5
.4
.3
.2
.1
.0
1x0j.b
2dvq.b
2dvr.b
2dvs.b
2ydw.a
2yek.b
3aqa.a
3aqa.b
4a9e.a
4a9f.a
4a9h.a
4a9i.a
4a9j.a
4a9m.a
4a9n.a
4a9o.a
4akn.a
4alg.a
4alh.a
4uyf.a
4uyh.a
5hel.a
5hem.a
5hen.a
[1] 1x0j.b
0
.04 .04 .02 .03 .03 .07 .02 .05 .02 .03 .04 .02 .04 .04 .04 .03 .09 .03 .02 .01 .02 .14 .01
[1] 2dvq.b .04
0
.01 .02 .04 .07 .06 .05 .03 .03 .02 .03 .05 .05 .03 .05 .03 .09 .04 .05 .04 .06 .12 .05
[1] 2dvr.b .04 .01
0
.03 .04 .07 .06 .05 .03 .03 .03 .03 .05 .05 .03 .05 .03 .08 .04 .05 .05 .06 .12 .05
[1] 2dvs.b .02 .02 .03
0
.02 .05 .07 .03 .05 .03 .02 .05 .03 .06 .05 .05 .04 .10 .03 .03 .02 .04 .13 .03
[1] 2ydw.a .03 .04 .04 .02
0
.05 .06 .05 .05 .03 .02 .05 .03 .05 .04 .05 .04 .11 .04 .04 .02 .02 .14 .02
[1] 2yek.b .03 .07 .07 .05 .05
0
.08 .05 .08 .05 .06 .06 .04 .07 .06 .05 .06 .11 .05 .04 .03 .05 .17 .03
[1] 3aqa.a .07 .06 .06 .07 .06 .08
0
.07 .07 .06 .07 .04 .06 .03 .04 .06 .05 .12 .05 .06 .06 .05 .15 .05
[1] 3aqa.b .02 .05 .05 .03 .05 .05 .07
0
.05 .03 .04 .03 .02 .04 .03 .03 .04 .08 .02 .01 .02 .04 .15 .02
[1] 4a9e.a .05 .03 .03 .05 .05 .08 .07 .05
0
.03 .03 .03 .04 .04 .03 .05 .03 .07 .04 .05 .04 .06 .12 .04
[1] 4a9f.a .02 .03 .03 .03 .03 .05 .06 .03 .03
0
.02 .02 .02 .03 .03 .04 .03 .08 .03 .03 .01 .03 .13 .02
[1] 4a9h.a .03 .02 .03 .02 .02 .06 .07 .04 .03 .02
0
.03 .04 .04 .03 .03 .02 .09 .02 .03 .02 .04 .13 .03
[1] 4a9i.a .04 .03 .03 .05 .05 .06 .04 .03 .03 .02 .03
0
.03 .01 .02 .04 .01 .07 .03 .03 .03 .04 .13 .03
[1] 4a9j.a .02 .05 .05 .03 .03 .04 .06 .02 .04 .02 .04 .03
0
.04 .03 .03 .03 .08 .03 .02 .02 .03 .14 .01
[1] 4a9m.a .04 .05 .05 .06 .05 .07 .03 .04 .04 .03 .04 .01 .04
0
.01 .03 .02 .08 .02 .03 .04 .03 .14 .03
[1] 4a9n.a .04 .03 .03 .05 .04 .06 .04 .03 .03 .03 .03 .02 .03 .01
0
.02 0 .08 .01 .03 .03 .05 .13 .03
[1] 4a9o.a .04 .05 .05 .05 .05 .05 .06 .03 .05 .04 .03 .04 .03 .03 .02
0
.03 .08 .01 .03 .04 .05 .13 .03
[1] 4akn.a .03 .03 .03 .04 .04 .06 .05 .04 .03 .03 .02 .01 .03 .02 0 .03
0
.08 .02 .03 .03 .04 .12 .02
[1] 4alg.a .09 .09 .08 .10 .11 .11 .12 .08 .07 .08 .09 .07 .08 .08 .08 .08 .08
0
.08 .08 .09 .10 .10 .08
[1] 4alh.a .03 .04 .04 .03 .04 .05 .05 .02 .04 .03 .02 .03 .03 .02 .01 .01 .02 .08
0
.02 .03 .04 .13 .02
[1] 4uyf.a .02 .05 .05 .03 .04 .04 .06 .01 .05 .03 .03 .03 .02 .03 .03 .03 .03 .08 .02
0
.02 .03 .15 .02
[1] 4uyh.a .01 .04 .05 .02 .02 .03 .06 .02 .04 .01 .02 .03 .02 .04 .03 .04 .03 .09 .03 .02
0
.02 .15 .01
[1] 5hel.a .02 .06 .06 .04 .02 .05 .05 .04 .06 .03 .04 .04 .03 .03 .05 .05 .04 .10 .04 .03 .02
0
.16 .02
[1] 5hem.a .14 .12 .12 .13 .14 .17 .15 .15 .12 .13 .13 .13 .14 .14 .13 .13 .12 .10 .13 .15 .15 .16
0
.14
[1] 5hen.a .01 .05 .05 .03 .02 .03 .05 .02 .04 .02 .03 .03 .01 .03 .03 .03 .02 .08 .02 .02 .01 .02 .14
0
[Pocket clash dissimilarity matrix]

Site backbone RMSD (median 0.6 Å)

Pockets (x) vs pockets (y) colored by RMSD of site residue backbone atoms

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pocketpocket
≥10 Å
9 Å
8 Å
7 Å
6 Å
5 Å
4 Å
3 Å
2 Å
1 Å
0 Å
1x0j.b
2dvq.b
2dvr.b
2dvs.b
2ydw.a
2yek.b
3aqa.a
3aqa.b
4a9e.a
4a9f.a
4a9h.a
4a9i.a
4a9j.a
4a9m.a
4a9n.a
4a9o.a
4akn.a
4alg.a
4alh.a
4uyf.a
4uyh.a
5hel.a
5hem.a
5hen.a
[1] 1x0j.b
0
0.2 0.2 0.1 0.3 0.4 0.3 0.2 0.4 0.3 0.3 0.2 0.2 0.2 0.2 0.3 0.2 0.9 0.2 0.3 0.2 0.3 0.8 0.2
[1] 2dvq.b 0.2
0
0.1 0.1 0.4 0.5 0.2 0.2 0.4 0.2 0.2 0.3 0.2 0.2 0.2 0.3 0.2 1.0 0.2 0.3 0.3 0.4 0.8 0.3
[1] 2dvr.b 0.2 0.1
0
0.1 0.3 0.5 0.2 0.2 0.4 0.2 0.2 0.3 0.2 0.2 0.2 0.3 0.2 1.0 0.2 0.3 0.2 0.4 0.9 0.3
[1] 2dvs.b 0.1 0.1 0.1
0
0.3 0.5 0.3 0.2 0.4 0.2 0.2 0.2 0.2 0.2 0.2 0.3 0.2 0.9 0.2 0.3 0.2 0.3 0.8 0.2
[1] 2ydw.a 0.3 0.4 0.3 0.3
0
0.3 0.4 0.4 0.6 0.4 0.2 0.3 0.3 0.2 0.3 0.2 0.3 1.1 0.2 0.2 0.2 0.4 1.0 0.3
[1] 2yek.b 0.4 0.5 0.5 0.5 0.3
0
0.5 0.5 0.8 0.5 0.4 0.4 0.4 0.4 0.4 0.3 0.4 1.1 0.4 0.4 0.4 0.4 1.1 0.4
[1] 3aqa.a 0.3 0.2 0.2 0.3 0.4 0.5
0
0.2 0.3 0.2 0.3 0.2 0.2 0.2 0.3 0.3 0.2 1.0 0.3 0.3 0.2 0.4 0.9 0.3
[1] 3aqa.b 0.2 0.2 0.2 0.2 0.4 0.5 0.2
0
0.3 0.2 0.3 0.2 0.2 0.2 0.3 0.4 0.3 0.9 0.3 0.4 0.3 0.3 0.8 0.3
[1] 4a9e.a 0.4 0.4 0.4 0.4 0.6 0.8 0.3 0.3
0
0.3 0.5 0.4 0.4 0.4 0.5 0.6 0.5 1.0 0.5 0.6 0.4 0.6 0.8 0.5
[1] 4a9f.a 0.3 0.2 0.2 0.2 0.4 0.5 0.2 0.2 0.3
0
0.3 0.2 0.2 0.2 0.3 0.3 0.3 1.0 0.3 0.3 0.2 0.4 0.9 0.4
[1] 4a9h.a 0.3 0.2 0.2 0.2 0.2 0.4 0.3 0.3 0.5 0.3
0
0.3 0.2 0.2 0.2 0.2 0.2 1.0 0.2 0.2 0.2 0.4 0.9 0.3
[1] 4a9i.a 0.2 0.3 0.3 0.2 0.3 0.4 0.2 0.2 0.4 0.2 0.3
0
0.2 0.2 0.2 0.3 0.2 1.0 0.3 0.3 0.2 0.4 0.9 0.3
[1] 4a9j.a 0.2 0.2 0.2 0.2 0.3 0.4 0.2 0.2 0.4 0.2 0.2 0.2
0
0.2 0.1 0.2 0.2 1.0 0.2 0.3 0.2 0.4 0.9 0.2
[1] 4a9m.a 0.2 0.2 0.2 0.2 0.2 0.4 0.2 0.2 0.4 0.2 0.2 0.2 0.2
0
0.2 0.2 0.2 1.0 0.2 0.2 0.1 0.4 0.9 0.3
[1] 4a9n.a 0.2 0.2 0.2 0.2 0.3 0.4 0.3 0.3 0.5 0.3 0.2 0.2 0.1 0.2
0
0.2 0.1 1.0 0.1 0.3 0.2 0.4 0.9 0.2
[1] 4a9o.a 0.3 0.3 0.3 0.3 0.2 0.3 0.3 0.4 0.6 0.3 0.2 0.3 0.2 0.2 0.2
0
0.2 1.0 0.2 0.2 0.2 0.4 0.9 0.3
[1] 4akn.a 0.2 0.2 0.2 0.2 0.3 0.4 0.2 0.3 0.5 0.3 0.2 0.2 0.2 0.2 0.1 0.2
0
1.0 0.1 0.2 0.2 0.4 0.9 0.2
[1] 4alg.a 0.9 1.0 1.0 0.9 1.1 1.1 1.0 0.9 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0
0
1.0 1.1 1.1 0.9 0.4 1.0
[1] 4alh.a 0.2 0.2 0.2 0.2 0.2 0.4 0.3 0.3 0.5 0.3 0.2 0.3 0.2 0.2 0.1 0.2 0.1 1.0
0
0.2 0.2 0.4 0.9 0.2
[1] 4uyf.a 0.3 0.3 0.3 0.3 0.2 0.4 0.3 0.4 0.6 0.3 0.2 0.3 0.3 0.2 0.3 0.2 0.2 1.1 0.2
0
0.2 0.5 1.0 0.3
[1] 4uyh.a 0.2 0.3 0.2 0.2 0.2 0.4 0.2 0.3 0.4 0.2 0.2 0.2 0.2 0.1 0.2 0.2 0.2 1.1 0.2 0.2
0
0.4 1.0 0.3
[1] 5hel.a 0.3 0.4 0.4 0.3 0.4 0.4 0.4 0.3 0.6 0.4 0.4 0.4 0.4 0.4 0.4 0.4 0.4 0.9 0.4 0.5 0.4
0
0.8 0.3
[1] 5hem.a 0.8 0.8 0.9 0.8 1.0 1.1 0.9 0.8 0.8 0.9 0.9 0.9 0.9 0.9 0.9 0.9 0.9 0.4 0.9 1.0 1.0 0.8
0
0.9
[1] 5hen.a 0.2 0.3 0.3 0.2 0.3 0.4 0.3 0.3 0.5 0.4 0.3 0.3 0.2 0.3 0.2 0.3 0.2 1.0 0.2 0.3 0.3 0.3 0.9
0
[Binding site backbone RMSD matrix]

Site full-atom RMSD (median 0.3 Å)

Pockets (x) vs pockets (y) colored by RMSD of all site residue atoms

zoom: [−] [+]; [view as image]; [download as text]

pocketpocket
≥10 Å
9 Å
8 Å
7 Å
6 Å
5 Å
4 Å
3 Å
2 Å
1 Å
0 Å
1x0j.b
2dvq.b
2dvr.b
2dvs.b
2ydw.a
2yek.b
3aqa.a
3aqa.b
4a9e.a
4a9f.a
4a9h.a
4a9i.a
4a9j.a
4a9m.a
4a9n.a
4a9o.a
4akn.a
4alg.a
4alh.a
4uyf.a
4uyh.a
5hel.a
5hem.a
5hen.a
[1] 1x0j.b
0
0.4 0.4 0.3 0.8 0.7 0.6 0.3 0.6 0.6 0.5 0.5 0.5 0.6 0.6 0.6 0.5 1.2 0.6 0.8 0.8 0.8 1.2 0.6
[1] 2dvq.b 0.4
0
0.1 0.2 0.7 0.8 0.6 0.4 0.6 0.6 0.6 0.5 0.6 0.6 0.6 0.6 0.5 1.3 0.6 0.8 0.8 0.9 1.3 0.6
[1] 2dvr.b 0.4 0.1
0
0.2 0.7 0.8 0.6 0.4 0.6 0.6 0.6 0.5 0.6 0.6 0.6 0.6 0.5 1.3 0.6 0.8 0.8 0.9 1.3 0.6
[1] 2dvs.b 0.3 0.2 0.2
0
0.7 0.7 0.6 0.4 0.6 0.6 0.5 0.5 0.5 0.6 0.6 0.6 0.5 1.2 0.6 0.8 0.8 0.8 1.3 0.6
[1] 2ydw.a 0.8 0.7 0.7 0.7
0
0.6 0.9 0.8 0.8 0.7 0.6 0.7 0.6 0.6 0.6 0.6 0.7 1.4 0.5 0.8 0.8 0.8 1.3 0.6
[1] 2yek.b 0.7 0.8 0.8 0.7 0.6
0
0.9 0.8 0.8 0.6 0.6 0.6 0.6 0.6 0.6 0.5 0.7 1.3 0.6 0.8 0.8 0.7 1.3 0.5
[1] 3aqa.a 0.6 0.6 0.6 0.6 0.9 0.9
0
0.5 0.7 0.7 0.7 0.6 0.7 0.7 0.7 0.7 0.6 1.3 0.7 0.9 0.8 0.9 1.4 0.7
[1] 3aqa.b 0.3 0.4 0.4 0.4 0.8 0.8 0.5
0
0.6 0.6 0.6 0.5 0.6 0.6 0.6 0.6 0.5 1.2 0.6 0.8 0.8 0.9 1.3 0.7
[1] 4a9e.a 0.6 0.6 0.6 0.6 0.8 0.8 0.7 0.6
0
0.4 0.5 0.5 0.4 0.4 0.5 0.6 0.6 1.3 0.5 0.7 0.7 0.8 1.2 0.6
[1] 4a9f.a 0.6 0.6 0.6 0.6 0.7 0.6 0.7 0.6 0.4
0
0.4 0.4 0.4 0.3 0.4 0.4 0.4 1.3 0.4 0.7 0.6 0.8 1.2 0.5
[1] 4a9h.a 0.5 0.6 0.6 0.5 0.6 0.6 0.7 0.6 0.5 0.4
0
0.5 0.3 0.2 0.3 0.3 0.5 1.3 0.3 0.6 0.6 0.8 1.3 0.4
[1] 4a9i.a 0.5 0.5 0.5 0.5 0.7 0.6 0.6 0.5 0.5 0.4 0.5
0
0.4 0.4 0.5 0.5 0.3 1.2 0.5 0.7 0.7 0.8 1.2 0.5
[1] 4a9j.a 0.5 0.6 0.6 0.5 0.6 0.6 0.7 0.6 0.4 0.4 0.3 0.4
0
0.2 0.3 0.3 0.5 1.3 0.4 0.7 0.6 0.7 1.2 0.4
[1] 4a9m.a 0.6 0.6 0.6 0.6 0.6 0.6 0.7 0.6 0.4 0.3 0.2 0.4 0.2
0
0.3 0.3 0.4 1.3 0.4 0.6 0.6 0.7 1.2 0.4
[1] 4a9n.a 0.6 0.6 0.6 0.6 0.6 0.6 0.7 0.6 0.5 0.4 0.3 0.5 0.3 0.3
0
0.4 0.4 1.2 0.2 0.6 0.6 0.7 1.2 0.3
[1] 4a9o.a 0.6 0.6 0.6 0.6 0.6 0.5 0.7 0.6 0.6 0.4 0.3 0.5 0.3 0.3 0.4
0
0.5 1.3 0.3 0.6 0.6 0.8 1.2 0.5
[1] 4akn.a 0.5 0.5 0.5 0.5 0.7 0.7 0.6 0.5 0.6 0.4 0.5 0.3 0.5 0.4 0.4 0.5
0
1.2 0.4 0.7 0.7 0.8 1.2 0.5
[1] 4alg.a 1.2 1.3 1.3 1.2 1.4 1.3 1.3 1.2 1.3 1.3 1.3 1.2 1.3 1.3 1.2 1.3 1.2
0
1.2 1.4 1.4 1.0 0.7 1.3
[1] 4alh.a 0.6 0.6 0.6 0.6 0.5 0.6 0.7 0.6 0.5 0.4 0.3 0.5 0.4 0.4 0.2 0.3 0.4 1.2
0
0.6 0.6 0.7 1.2 0.3
[1] 4uyf.a 0.8 0.8 0.8 0.8 0.8 0.8 0.9 0.8 0.7 0.7 0.6 0.7 0.7 0.6 0.6 0.6 0.7 1.4 0.6
0
0.2 0.9 1.4 0.7
[1] 4uyh.a 0.8 0.8 0.8 0.8 0.8 0.8 0.8 0.8 0.7 0.6 0.6 0.7 0.6 0.6 0.6 0.6 0.7 1.4 0.6 0.2
0
0.9 1.4 0.7
[1] 5hel.a 0.8 0.9 0.9 0.8 0.8 0.7 0.9 0.9 0.8 0.8 0.8 0.8 0.7 0.7 0.7 0.8 0.8 1.0 0.7 0.9 0.9
0
1.0 0.7
[1] 5hem.a 1.2 1.3 1.3 1.3 1.3 1.3 1.4 1.3 1.2 1.2 1.3 1.2 1.2 1.2 1.2 1.2 1.2 0.7 1.2 1.4 1.4 1.0
0
1.2
[1] 5hen.a 0.6 0.6 0.6 0.6 0.6 0.5 0.7 0.7 0.6 0.5 0.4 0.5 0.4 0.4 0.3 0.5 0.5 1.3 0.3 0.7 0.7 0.7 1.2
0
[Binding site full-atom RMSD matrix]







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[ENTRY 2D visualization]

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