BIOF_ECOLI_1_384

8-amino-7-oxononanoate synthase [Class-II pyridoxal-phosphate-dependent aminotransferase family. BioF subfamily]

ActiveICM:

L C E

Composition of the binding pockets

Protein chains homodimer[show domain annotation]
 • A1 (BIOF_ECOLI):R: Pyridoxal phosphate binding (108,109)
21,47,107,133,135,175,179,180,204,206,207,233,236,348,352
21,47,107:109,133,135,175,179,180,204,206,207,233,236,348,352
 • A2 (BIOF_ECOLI):75,76,78,79,263:26675,76,78,79,263:266

Full PDB list

1bs0,1dj9,1dje,2g6w

Contact map

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ligand
A1 A2
R
2
1
N
4
7
S
1
0
7
G
1
0
8
F
1
0
9
H
1
3
3
S
1
3
5
E
1
7
5
S
1
7
9
M
1
8
0
D
2
0
4
A
2
0
6
H
2
0
7
T
2
3
3
K
2
3
6
I
3
4
8
T
3
5
2
G
7
5
S
7
6
H
7
8
V
7
9
I
2
6
3
Y
2
6
4
S
2
6
5
T
2
6
6
[1]1dj9.a kam,mg 29 . . . . . . . . . . . . . . . . . . . . . . . . .
[1]2g6w.a llf 20 . . . . . . . . . . . . . . * . . . . . . . . . .
[1]1bs0.a none . . . . . . . . . . . . . . . . . . . . . . . . .
[1]1dje.a plp 15 . . . . . . . . . . . . . . * . . . . . . . . . .

Legend

B backbone contact  S side chain contact  F BB + SCh
.
 no contact C covalent bond
X X X X X  clash
X mutation to X * complex cases - deletion
M contact with cofactors/metals (if any)
[icb] Download ICM binary file
[xml] Download XML file
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