BIOA_ECOLI_1_429

Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily]

ActiveICM:

L C E

Composition of the binding pockets

Protein chains homodimer[show domain annotation]
 • A1 (BIOA_ECOLI):R: Pyridoxal phosphate binding (112,113)
17,52,53,144:147,211,217,245,247,248,274,391,393
17,52,53,112,113,144:147,211,217,245,247,248,274,391,393
 • A2 (BIOA_ECOLI):R: Pyridoxal phosphate binding (308,309)
307
307:309

Full PDB list

1dty,1mgv,1mly,1mlz,1qj3,1qj5,1s06,1s07,1s08,1s09,1s0a (redundant pocketome entry)

Contact map

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ligand
A1 A2
Y
1
7
W
5
2
W
5
3
G
1
1
2
S
1
1
3
Y
1
4
4
H
1
4
5
G
1
4
6
D
1
4
7
E
2
1
1
A
2
1
7
D
2
4
5
I
2
4
7
A
2
4
8
K
2
7
4
R
3
9
1
F
3
9
3
G
3
0
7
P
3
0
8
T
3
0
9
[1]1mly.a acz.plp 29 . . . . . . . . . . . . . . . . . . . .
[1]1qj3.a kap,plp 28 . . . . . . . . . . . . . . * . . . . .
[1]1mlz.a plp.tza 29 . . . . . . . . . . . . . . . . . . . .
[1]1mlz.b plp,tza 29 . . . . . . . . . . . . . . . . . . . .
[1]1mgv.a plp 15 . . . . . . . . . . . . . . * A . . . .
[1]1s07.a plp 16 . . . . . . . . . . . . . . . . . . . .
[1]1s08.a plp 15 . . . . . . . . N . . . . . * . . . . .
[1]1s09.a plp 15 . . . . . F . . . . . . . . * . . . . .
[1]1s0a.b plp 15 F . . . . . . . . . . . . . * . . . . .

Legend

B backbone contact  S side chain contact  F BB + SCh
.
 no contact C covalent bond
X X X X X  clash
X mutation to X * complex cases - deletion
M contact with cofactors/metals (if any)
[icb] Download ICM binary file
[xml] Download XML file
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