AMPD_CITFR_1_187

1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD [N-acetylmuramoyl-L-alanine amidase 2 family]

ActiveICM:

L C E

Composition of the binding pockets

Protein chains monomer
 • A1 (AMPD_CITFR):34,52,71:73,95:98,107,109,116,154,16134,52,71:73,95:98,107,109,116,154,161
Metals (Me):Zn

Full PDB list

2y28,2y2b,2y2c,2y2d,2y2e (redundant pocketome entry)

Contact map

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ligand
A1 Me
H
3
4
F
5
2
R
7
1
V
7
2
S
7
3
W
9
5
H
9
6
A
9
7
G
9
8
R
1
0
7
N
1
0
9
E
1
1
6
H
1
5
4
R
1
6
1
[1]2y2b.a mhi 27 . . . . . . . . . . . . . . Zn
[1]2y2d.c none . . . . . . . . . . . . . . Zn

Legend

B backbone contact  S side chain contact  F BB + SCh
.
 no contact C covalent bond
X X X X X  clash
X mutation to X * complex cases - deletion
M contact with cofactors/metals (if any)
[icb] Download ICM binary file
[xml] Download XML file
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