6PGD_HUMAN_1_476

6-phosphogluconate dehydrogenase, decarboxylating [6-phosphogluconate dehydrogenase family]

ActiveICM:

L C E

Composition of the binding pockets

Protein chains monomer[show domain annotation]
 • A1 (6PGD_HUMAN):R: Substrate binding (129:131)
R: Substrate binding (187,188)
10:14,33:35,38,74:76,80,84,102,103,128,132,184,191,192,261:263,288,367
10:14,33:35,38,74:76,80,84,102,103,128:132,184,187,188,191,192,261:263,288,367

Full PDB list

1pgn,1pgo,1pgp,1pgq,2jkv,2pgd,4gwg,4gwk (redundant pocketome entry)

Contact map

[download in TSV format]
   
PDB.ch
   
ligand
A1
G
1
0
L
1
1
A
1
2
V
1
3
M
1
4
N
3
3
R
3
4
T
3
5
K
3
8
L
7
4
V
7
5
K
7
6
A
8
0
F
8
4
G
1
0
2
N
1
0
3
V
1
2
8
S
1
2
9
G
1
3
0
G
1
3
1
E
1
3
2
K
1
8
4
H
1
8
7
N
1
8
8
E
1
9
1
Y
1
9
2
K
2
6
1
G
2
6
2
T
2
6
3
R
2
8
8
I
3
6
7
[1]1pgp.a 6pg 17 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]1pgq.a none . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]4gwk.a 3pg 11 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]1pgn.a nbp 49 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]1pgo.a ndp 48 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[2]2jkv.a nap 48 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]4gwg.a none . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .

Legend

B backbone contact  S side chain contact  F BB + SCh
.
 no contact C covalent bond
X X X X X  clash
X mutation to X * complex cases - deletion
M contact with cofactors/metals (if any)
[icb] Download ICM binary file
[xml] Download XML file
Similar entries
Feedback