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1B57_HUMAN_24_300

HLA class I histocompatibility antigen, B-57 alpha chain [MHC class I family]

Composition of the binding site

Protein chains monomer [domain annotation]
A1 (1B57_HUMAN):R: Alpha-1 (29, 31, 33, 69, 82, 83, 86, 87, 90, 91, 93, 94, 97, 98, 100, 101, 104, 105, 108)
R: Alpha-2 (119, 121, 123, 138:142, 147, 148, 157, 167, 170, 171, 174, 176, 179, 180, 183, 187, 191, 195)
29, 31, 33, 69, 82, 83, 86, 87, 90, 91, 93, 94, 97, 98, 100, 101, 104, 105, 108, 119, 121, 123, 138:142, 147, 148, 157, 167, 170, 171, 174, 176, 179, 180, 183, 187, 191, 195

Full PDB list

2bvo, 2bvp, 2bvq, 2hjk, 2hjl, 2rfx, 2ypk, 2ypl, 3upr, 3vh8, 3vri, 3vrj, 3wuw, 3x11, 3x12, 5b38, 5b39, 5t6w, 5t6x, 5t6y, 5t6z, 5t70, 5u98, 5v5m, 6bxp, 6bxq (redundant Pocketome entry)

Pocket contact map

[download in TSV format]
   
PDB.ch
   
ligand
A1
M
2
9
Y
3
1
Y
3
3
M
6
9
Y
8
3
G
8
6
E
8
7
N
9
0
M
9
1
A
9
3
S
9
4
T
9
7
Y
9
8
E
1
0
0
N
1
0
1
I
1
0
4
A
1
0
5
Y
1
0
8
I
1
1
9
V
1
2
1
Y
1
2
3
D
1
3
8
Q
1
3
9
S
1
4
0
Y
1
4
2
Y
1
4
7
I
1
4
8
W
1
5
7
T
1
6
7
K
1
7
0
W
1
7
1
A
1
7
4
V
1
7
6
Q
1
7
9
L
1
8
0
Y
1
8
3
L
1
8
7
W
1
9
1
Y
1
9
5
[1]2bvo.a KAFSPEVIPMF89 . . . . . . . . . . . . . . . . . . . . . N . Y . . . . . . . . . . . . . . .
[1]2bvp.a ISPRTLDAW74 . . . . . . . . . . . . . . . . . . . . . N . Y . . . . . . . . . . . . . . .
[1]2bvq.a KAFSPEVIP63 . . . . . . . . . . . . . . . . . . . . . N . Y . . . . . . . . . . . . . . .
[1]2hjk.a KGFNPEVIPMF90 . . . . . . . . . . . . . . . . . . . . . . . . . . . . I . . . . . . . . . .
[1]2hjl.a KAFNPEIIPMF92 . . . . . . . . . . . . . . . . . . . . . . . . . . . . I . . . . . . . . . .
[1]2ypk.a KAFSPEVIPMF89 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]2ypl.a KAFSPEVIPMF,Y-SGGYQ136 . . . . . . . . . . . . . . . . . . . . . . . Y . . . . I . . . . . . . . . .
[1]3upr.c 1kx,HSITYLLPV95 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]3vh8.a LSSPVTKSF68 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]3vri.a 1kx,RVAQLEQVYI99 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]3vrj.a 1kx,LTTKLTNTNI99 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]3wuw.a LSSPVTKSF68 . . . . . . . . . . . . . . . T . . . . . . . . . . . . . . . . . . . . . . .
[1]3x12.a LSSPVTKSF68 . . . . . . . . . . . . . . . N . . . . . . . . . . . . . . . . . . . . . . .
[1]5t6w.a SSTRGISQLW80 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]5t6x.a TSTTSVASSW72 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]5t6y.a TSTFEDVKILAF97 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]5t6z.a TSTLQEQIGW82 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]5t70.a TSNLQEQIGW83 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]5u98.a 1kx,VTTDIQVKV91 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]6bxp.a RVK-HLkyn60 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
[1]6bxq.b RVKE-QHLW78 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .

Legend

B backbone contact  S side chain contact  F BB + SCh
.
 no contact C covalent bond
X mutation to X * complex cases - deletion
M contact with cofactors/metals (if any)

Site contact map

[download in TSV format]
   
PDB.ch
A1
M
2
9
Y
3
1
Y
3
3
M
6
9
E
8
2
Y
8
3
G
8
6
E
8
7
N
9
0
M
9
1
A
9
3
S
9
4
T
9
7
Y
9
8
E
1
0
0
N
1
0
1
I
1
0
4
A
1
0
5
Y
1
0
8
I
1
1
9
V
1
2
1
Y
1
2
3
D
1
3
8
Q
1
3
9
S
1
4
0
A
1
4
1
Y
1
4
2
Y
1
4
7
I
1
4
8
W
1
5
7
T
1
6
7
K
1
7
0
W
1
7
1
A
1
7
4
V
1
7
6
Q
1
7
9
L
1
8
0
Y
1
8
3
L
1
8
7
W
1
9
1
Y
1
9
5
[1]2bvo.a . . . . . . . . . . . . . . . . . . . . . * N . Y . . . . . . . . . . . . . . . .
[1]2bvp.a . . . . . . . . . . . . . . . . . . . . . * N . Y . . . . . . . . . . * . . . . .
[1]2bvq.a . . . . . . . * . . . . . . . . . . . . . * N . Y . . . . . . . . . . . . . . . .
[1]2hjk.a . . . . . . . . . . . . . . . . . . . . . * . . * . . . . . I . . . . . . . . . .
[1]2hjl.a . . . . . . . . . . . . . . . . . . . . . * . . * . . . . . I . . . . . . . . . .
[1]2ypk.a . . . . . . . . . . . . . . . . . . . . . * . . * . . . . . . . . . . . . . . . .
[1]2ypl.a . . . . . . . . . . . . . . . . . . . . . * . . Y . . . . . I . . . . * . . . . .
[1]3upr.c . . . . . . . . . . . . . . . . . . . . . * . . . . . . . . . . . . . . . * . . .
[1]3vh8.a . . . . . . . . . . . . . . . . . . . . . * . . * . . . . . . . . . . . . . . . .
[1]3vri.a . . . . . . . . * . . . . . . . . . . . . * . . . . . . . . . . . . . . . . * . .
[1]3vrj.a . . . . . . . . * . . . . . * . . . . . . * . . . . . . . . . . . . . . . . . . .
[1]3wuw.a . . . . . . . * . . . . . . . . T . . . . * . . * . . . . . . . . . . . . . . . .
[1]3x12.a . . . . . . . . * . . . . * * . N . . . . * . . * . . . . . . . . . . . . . . . .
[1]5t6w.a . . . . . . . * * . . . . . . . . . . . . * . . * . . . . . . . . . . . . . . . .
[1]5t6x.a . . . . . . . * . . . . . . . . . . . . . * . . * . . . . . . . . . . . . . . . .
[1]5t6y.a . . . . . . . * * . . . . * . . . . . . . * . . * . . . . . . . . . . . . . . . .
[1]5t6z.a . . . . . . . . . . . . . . . . . . . . . * . . * . . . . . . . . . . . . . . . .
[1]5t70.a . . . . . . . . . . . . . * . . . . . . . * . . * . . . . . . . . . . . . . . . .
[1]5u98.a . . . . . . . . . . . . . . . . . . . . . * . . . . . . . . . . . . . . . . . . .
[1]6bxp.a . . . . . . . . * . . . . . . . . . . . . * . . . . . . . . . . . . . . . . . . .
[1]6bxq.b . . . . . . . . * . . . . . . . . . . . . * . . * . . . . . . . . . . . . . . . .

Legend

B backbone contact  S side chain contact  F BB + SCh
.
 no contact C covalent bond
X X X X X  clash
X mutation to X * complex cases - deletion
M contact with cofactors/metals (if any)

Pocket-ligand steric compatibility

Ligands (x) vs pockets (y) colored by number of steric clashes

zoom: [−] [+]; [view as image]; [download as text]

pocketligand
≥10
9
8
7
6
5
4
3
2
1
0
2bvo.a:KAFSPEVIPMF
2bvp.a:ISPRTLDAW
2bvq.a:KAFSPEVIP
2hjk.a:KGFNPEVIPMF
2hjl.a:KAFNPEIIPMF
2ypk.a:KAFSPEVIPMF
2ypl.a:KAFSPEVIPMF,Y-SGGYQ
3upr.c:1kx,HSITYLLPV
3vh8.a:LSSPVTKSF
3vri.a:1kx,RVAQLEQVYI
3vrj.a:1kx,LTTKLTNTNI
3wuw.a:LSSPVTKSF
3x12.a:LSSPVTKSF
5t6w.a:SSTRGISQLW
5t6x.a:TSTTSVASSW
5t6y.a:TSTFEDVKILAF
5t6z.a:TSTLQEQIGW
5t70.a:TSNLQEQIGW
5u98.a:1kx,VTTDIQVKV
6bxp.a:RVK-HLkyn
6bxq.b:RVKE-QHLW
[1] 2bvo.a
0.1
1.5 0.1 0.2 0 0 0.3 6.1 0.6 5.1 5.5 0.7 1.6 0.3 0.2 1.1 0.4 0.3 5.1 0.5 0.6
[1] 2bvp.a 0.7
0
0.2 0.6 0.6 0.6 0.9 7.9 1.3 7.2 7.7 1.5 2.0 2.9 0.7 1.4 1.1 0.6 7.1 2.9 3.2
[1] 2bvq.a 0.6 1.6
0.1
0.5 0.8 0.6 0.6 6.2 0.9 5.7 6.1 1.1 1.1 0.4 0.8 0.9 0.7 0.5 5.6 1.1 1.0
[1] 2hjk.a 0.3 1.7 0.2
0.4
0.3 0.2 0.5 2.7 0.8 1.7 2.0 0.6 1.3 0.5 0.4 1.0 0.7 0.5 1.6 0.7 0.8
[1] 2hjl.a 0.2 1.4 0.2 0.2
0.2
0.1 0.3 2.1 0.4 1.2 1.5 0.3 0.8 0.4 0.2 0.7 0.6 0.3 1.4 0.6 0.6
[1] 2ypk.a 0.1 1.3 0.1 0.1 0
0
0.4 2.2 0.5 1.6 1.6 0.5 1.2 0.4 0.3 0.9 0.6 0.1 1.5 0.5 0.4
[1] 2ypl.a 0.8 1.9 0.9 0.8 0.8 0.8
0.2
7.7 3.1 6.6 7.2 2.8 3.7 1.4 1.7 2.1 1.1 0.9 6.1 1.0 1.9
[1] 3upr.c 0.5 1.7 0.6 0.6 0.6 0.4 0.8
0.1
0.7 0.8 0.5 0.7 1.5 0.4 0.2 0.5 0.3 0.5 0.5 0.6 1.0
[1] 3vh8.a 0.4 2.5 0.5 0.8 0.9 0.3 1.3 3.5
0.1
1.8 2.8 0.2 0.2 0.6 0.5 0.9 0.8 0.4 3.0 0.4 0.5
[1] 3vri.a 0.4 2.1 0.2 1.0 0.7 0.2 0.6 1.4 0.8
0
0.4 0.9 1.6 1.0 1.2 1.2 1.2 0.2 1.0 0.3 0.3
[1] 3vrj.a 0.6 2.4 0.3 1.0 0.7 0.2 0.6 1.1 0.6 0.7
0.2
0.7 1.0 0.3 0.4 0.3 0.6 0.4 0.4 0.4 0.4
[1] 3wuw.a 0.3 2.0 0.3 0.8 0.8 0.2 1.1 3.7 0 1.8 2.6
0.1
0.2 0.6 0.3 0.9 0.7 0.2 3.2 0.5 0.5
[1] 3x12.a 1.7 3.5 1.5 1.3 1.8 1.3 2.1 5.1 0.4 4.3 4.4 0.6
0.2
1.3 1.0 1.2 1.7 1.2 4.2 1.2 1.2
[1] 5t6w.a 0.4 2.7 0.4 1.0 0.8 0.2 0.7 3.4 0.6 2.0 1.8 0.4 0.7
0.3
0.1 0.6 0.4 0.1 2.7 0.4 0.5
[1] 5t6x.a 0.6 1.6 0.7 1.0 0.8 0.6 1.0 3.0 0.5 1.6 2.5 0.4 0.5 0.3
0
0.5 0.2 0.4 2.4 0.5 0.7
[1] 5t6y.a 0.4 2.4 0.3 1.0 0.7 0.2 0.4 3.2 0.7 2.0 2.0 0.5 0.7 0.1 0.1
0
0.4 0.2 2.6 0.5 0.4
[1] 5t6z.a 0.8 1.4 0.7 1.0 1.0 0.8 1.2 2.3 0.4 1.7 2.4 0.3 0.6 0.2 0.2 0.6
0
0.4 2.3 0.6 1.0
[1] 5t70.a 0.4 1.2 0.2 0.5 0.5 0.3 0.7 2.8 0.4 1.7 2.3 0.1 0.4 0.2 0.2 0.8 0.2
0
2.0 0.2 0.6
[1] 5u98.a 0.5 1.7 0.5 0.5 0.5 0.3 0.6 0.7 0.6 0.3 0.4 0.7 1.2 0.3 0.4 0.7 0.5 0.2
0
0.9 0.8
[1] 6bxp.a 0.3 1.9 0.2 1.2 0.8 0.2 0.5 2.5 0.2 0.8 0.8 0.2 0.5 0.2 0.4 0.6 0.4 0.2 1.7
0
0.1
[1] 6bxq.b 0.3 2.2 0.1 1.3 0.9 0.3 0.7 3.0 0.4 1.1 1.2 0.3 0.4 0.1 0.3 0.4 0.4 0.1 2.3 0
0
[Pocket-ligand steric clashes matrix]

Pocket clash dissimilarity (1 cluster)

Pockets (x) vs pockets (y) colored by ligand clash profile difference

zoom: [−] [+]; [view as image]; [download as text]

pocketpocket
≥1.
.9
.8
.7
.6
.5
.4
.3
.2
.1
.0
2bvo.a
2bvp.a
2bvq.a
2hjk.a
2hjl.a
2ypk.a
2ypl.a
3upr.c
3vh8.a
3vri.a
3vrj.a
3wuw.a
3x12.a
5t6w.a
5t6x.a
5t6y.a
5t6z.a
5t70.a
5u98.a
6bxp.a
6bxq.b
[1] 2bvo.a
0
.09 .06 .12 .11 .12 .07 .21 .18 .18 .19 .18 .26 .15 .17 .19 .16 .15 .18 .16 .15
[1] 2bvp.a .09
0
.10 .17 .18 .18 .13 .22 .21 .23 .23 .21 .29 .20 .20 .22 .18 .18 .19 .20 .20
[1] 2bvq.a .06 .10
0
.15 .15 .15 .12 .21 .19 .19 .18 .18 .25 .18 .17 .20 .16 .17 .19 .17 .18
[1] 2hjk.a .12 .17 .15
0
.02 .03 .17 .12 .08 .08 .10 .08 .16 .06 .07 .08 .06 .04 .08 .06 .05
[1] 2hjl.a .11 .18 .15 .02
0
.02 .18 .10 .08 .08 .08 .08 .16 .07 .06 .08 .06 .05 .07 .05 .04
[1] 2ypk.a .12 .18 .15 .03 .02
0
.18 .11 .08 .08 .08 .07 .16 .06 .06 .09 .06 .05 .08 .06 .05
[1] 2ypl.a .07 .13 .12 .17 .18 .18
0
.23 .23 .24 .24 .23 .30 .21 .21 .21 .20 .20 .20 .22 .22
[1] 3upr.c .21 .22 .21 .12 .10 .11 .23
0
.16 .10 .07 .16 .23 .14 .12 .14 .11 .13 .05 .12 .14
[1] 3vh8.a .18 .21 .19 .08 .08 .08 .23 .16
0
.13 .12 .01 .11 .07 .07 .07 .07 .06 .14 .07 .06
[1] 3vri.a .18 .23 .19 .08 .08 .08 .24 .10 .13
0
.05 .13 .21 .12 .10 .13 .10 .09 .06 .07 .09
[1] 3vrj.a .19 .23 .18 .10 .08 .08 .24 .07 .12 .05
0
.13 .18 .12 .11 .12 .11 .10 .06 .08 .10
[1] 3wuw.a .18 .21 .18 .08 .08 .07 .23 .16 .01 .13 .13
0
.11 .05 .05 .06 .07 .05 .14 .07 .06
[1] 3x12.a .26 .29 .25 .16 .16 .16 .30 .23 .11 .21 .18 .11
0
.15 .14 .12 .16 .14 .23 .14 .13
[1] 5t6w.a .15 .20 .18 .06 .07 .06 .21 .14 .07 .12 .12 .05 .15
0
.04 .05 .06 .05 .12 .06 .05
[1] 5t6x.a .17 .20 .17 .07 .06 .06 .21 .12 .07 .10 .11 .05 .14 .04
0
.04 .04 .04 .11 .05 .04
[1] 5t6y.a .19 .22 .20 .08 .08 .09 .21 .14 .07 .13 .12 .06 .12 .05 .04
0
.08 .05 .13 .06 .06
[1] 5t6z.a .16 .18 .16 .06 .06 .06 .20 .11 .07 .10 .11 .07 .16 .06 .04 .08
0
.04 .09 .07 .07
[1] 5t70.a .15 .18 .17 .04 .05 .05 .20 .13 .06 .09 .10 .05 .14 .05 .04 .05 .04
0
.10 .05 .03
[1] 5u98.a .18 .19 .19 .08 .07 .08 .20 .05 .14 .06 .06 .14 .23 .12 .11 .13 .09 .10
0
.09 .10
[1] 6bxp.a .16 .20 .17 .06 .05 .06 .22 .12 .07 .07 .08 .07 .14 .06 .05 .06 .07 .05 .09
0
.02
[1] 6bxq.b .15 .20 .18 .05 .04 .05 .22 .14 .06 .09 .10 .06 .13 .05 .04 .06 .07 .03 .10 .02
0
[Pocket clash dissimilarity matrix]

Site backbone RMSD (median 0.8 Å)

Pockets (x) vs pockets (y) colored by RMSD of site residue backbone atoms

zoom: [−] [+]; [view as image]; [download as text]

pocketpocket
≥10 Å
9 Å
8 Å
7 Å
6 Å
5 Å
4 Å
3 Å
2 Å
1 Å
0 Å
2bvo.a
2bvp.a
2bvq.a
2hjk.a
2hjl.a
2ypk.a
2ypl.a
3upr.c
3vh8.a
3vri.a
3vrj.a
3wuw.a
3x12.a
5t6w.a
5t6x.a
5t6y.a
5t6z.a
5t70.a
5u98.a
6bxp.a
6bxq.b
[1] 2bvo.a
0
0.3 0.3 0.1 0.1 0.1 0.3 0.5 0.5 0.3 0.4 0.5 0.7 0.3 0.3 0.3 0.3 0.3 0.4 0.3 0.3
[1] 2bvp.a 0.3
0
0.5 0.3 0.3 0.4 0.4 0.6 0.6 0.5 0.5 0.6 0.7 0.4 0.4 0.4 0.4 0.5 0.5 0.3 0.4
[1] 2bvq.a 0.3 0.5
0
0.3 0.2 0.3 0.5 0.5 0.5 0.4 0.4 0.5 0.8 0.4 0.4 0.4 0.3 0.3 0.4 0.3 0.3
[1] 2hjk.a 0.1 0.3 0.3
0
0.1 0.2 0.3 0.5 0.4 0.3 0.4 0.4 0.6 0.2 0.2 0.2 0.3 0.3 0.4 0.2 0.2
[1] 2hjl.a 0.1 0.3 0.2 0.1
0
0.2 0.3 0.5 0.5 0.3 0.3 0.5 0.7 0.3 0.3 0.3 0.3 0.3 0.4 0.3 0.2
[1] 2ypk.a 0.1 0.4 0.3 0.2 0.2
0
0.4 0.5 0.5 0.3 0.3 0.5 0.7 0.2 0.2 0.3 0.3 0.3 0.4 0.3 0.3
[1] 2ypl.a 0.3 0.4 0.5 0.3 0.3 0.4
0
0.5 0.6 0.4 0.4 0.6 0.8 0.4 0.4 0.4 0.4 0.4 0.5 0.4 0.4
[1] 3upr.c 0.5 0.6 0.5 0.5 0.5 0.5 0.5
0
0.8 0.4 0.4 0.7 1.0 0.6 0.6 0.6 0.5 0.6 0.2 0.6 0.6
[1] 3vh8.a 0.5 0.6 0.5 0.4 0.5 0.5 0.6 0.8
0
0.5 0.5 0.1 0.5 0.4 0.3 0.4 0.3 0.3 0.7 0.4 0.3
[1] 3vri.a 0.3 0.5 0.4 0.3 0.3 0.3 0.4 0.4 0.5
0
0.1 0.4 0.7 0.4 0.4 0.4 0.3 0.3 0.3 0.4 0.3
[1] 3vrj.a 0.4 0.5 0.4 0.4 0.3 0.3 0.4 0.4 0.5 0.1
0
0.5 0.8 0.4 0.4 0.4 0.3 0.4 0.3 0.4 0.4
[1] 3wuw.a 0.5 0.6 0.5 0.4 0.5 0.5 0.6 0.7 0.1 0.4 0.5
0
0.5 0.3 0.3 0.4 0.3 0.3 0.6 0.4 0.3
[1] 3x12.a 0.7 0.7 0.8 0.6 0.7 0.7 0.8 1.0 0.5 0.7 0.8 0.5
0
0.5 0.5 0.6 0.7 0.6 0.9 0.6 0.6
[1] 5t6w.a 0.3 0.4 0.4 0.2 0.3 0.2 0.4 0.6 0.4 0.4 0.4 0.3 0.5
0
0.1 0.2 0.3 0.3 0.5 0.2 0.2
[1] 5t6x.a 0.3 0.4 0.4 0.2 0.3 0.2 0.4 0.6 0.3 0.4 0.4 0.3 0.5 0.1
0
0.3 0.3 0.3 0.5 0.2 0.2
[1] 5t6y.a 0.3 0.4 0.4 0.2 0.3 0.3 0.4 0.6 0.4 0.4 0.4 0.4 0.6 0.2 0.3
0
0.3 0.3 0.5 0.2 0.2
[1] 5t6z.a 0.3 0.4 0.3 0.3 0.3 0.3 0.4 0.5 0.3 0.3 0.3 0.3 0.7 0.3 0.3 0.3
0
0.2 0.4 0.3 0.3
[1] 5t70.a 0.3 0.5 0.3 0.3 0.3 0.3 0.4 0.6 0.3 0.3 0.4 0.3 0.6 0.3 0.3 0.3 0.2
0
0.5 0.3 0.2
[1] 5u98.a 0.4 0.5 0.4 0.4 0.4 0.4 0.5 0.2 0.7 0.3 0.3 0.6 0.9 0.5 0.5 0.5 0.4 0.5
0
0.5 0.5
[1] 6bxp.a 0.3 0.3 0.3 0.2 0.3 0.3 0.4 0.6 0.4 0.4 0.4 0.4 0.6 0.2 0.2 0.2 0.3 0.3 0.5
0
0.1
[1] 6bxq.b 0.3 0.4 0.3 0.2 0.2 0.3 0.4 0.6 0.3 0.3 0.4 0.3 0.6 0.2 0.2 0.2 0.3 0.2 0.5 0.1
0
[Binding site backbone RMSD matrix]

Site full-atom RMSD (median 0.4 Å)

Pockets (x) vs pockets (y) colored by RMSD of all site residue atoms

zoom: [−] [+]; [view as image]; [download as text]

pocketpocket
≥10 Å
9 Å
8 Å
7 Å
6 Å
5 Å
4 Å
3 Å
2 Å
1 Å
0 Å
2bvo.a
2bvp.a
2bvq.a
2hjk.a
2hjl.a
2ypk.a
2ypl.a
3upr.c
3vh8.a
3vri.a
3vrj.a
3wuw.a
3x12.a
5t6w.a
5t6x.a
5t6y.a
5t6z.a
5t70.a
5u98.a
6bxp.a
6bxq.b
[1] 2bvo.a
0
0.7 0.5 0.4 0.4 0.5 0.8 0.8 0.9 0.9 1.0 0.8 1.1 0.7 0.7 0.7 0.7 0.8 0.7 0.6 0.7
[1] 2bvp.a 0.7
0
0.8 0.7 0.8 0.9 1.0 1.1 1.0 1.1 1.1 1.0 1.1 0.9 0.9 0.9 0.9 1.0 0.9 0.8 1.0
[1] 2bvq.a 0.5 0.8
0
0.5 0.5 0.7 0.9 0.8 0.9 1.0 1.0 0.9 1.1 0.7 0.8 0.8 0.8 0.9 0.8 0.7 0.8
[1] 2hjk.a 0.4 0.7 0.5
0
0.2 0.7 0.8 0.9 0.9 1.0 1.1 0.9 1.1 0.7 0.7 0.7 0.8 0.9 0.8 0.7 0.8
[1] 2hjl.a 0.4 0.8 0.5 0.2
0
0.7 0.8 0.9 0.9 1.0 1.1 0.9 1.1 0.7 0.8 0.8 0.8 0.9 0.8 0.7 0.8
[1] 2ypk.a 0.5 0.9 0.7 0.7 0.7
0
0.6 1.0 0.7 0.9 1.0 0.7 0.9 0.6 0.5 0.6 0.5 0.7 0.8 0.6 0.6
[1] 2ypl.a 0.8 1.0 0.9 0.8 0.8 0.6
0
1.0 0.8 1.0 1.0 0.8 1.1 0.8 0.8 0.8 0.6 0.8 0.8 0.8 0.8
[1] 3upr.c 0.8 1.1 0.8 0.9 0.9 1.0 1.0
0
1.1 1.0 0.9 1.1 1.2 1.0 1.1 1.0 0.9 1.1 0.8 1.0 1.0
[1] 3vh8.a 0.9 1.0 0.9 0.9 0.9 0.7 0.8 1.1
0
0.9 1.0 0.1 0.7 0.8 0.8 0.8 0.6 0.4 0.9 0.8 0.8
[1] 3vri.a 0.9 1.1 1.0 1.0 1.0 0.9 1.0 1.0 0.9
0
0.6 0.9 1.0 0.8 0.8 0.9 0.9 0.9 0.9 0.9 0.9
[1] 3vrj.a 1.0 1.1 1.0 1.1 1.1 1.0 1.0 0.9 1.0 0.6
0
1.0 0.9 0.9 1.0 0.9 1.0 1.0 1.0 1.0 1.1
[1] 3wuw.a 0.8 1.0 0.9 0.9 0.9 0.7 0.8 1.1 0.1 0.9 1.0
0
0.7 0.8 0.8 0.8 0.6 0.3 0.8 0.8 0.8
[1] 3x12.a 1.1 1.1 1.1 1.1 1.1 0.9 1.1 1.2 0.7 1.0 0.9 0.7
0
0.9 0.9 1.0 0.9 0.8 1.1 1.0 1.0
[1] 5t6w.a 0.7 0.9 0.7 0.7 0.7 0.6 0.8 1.0 0.8 0.8 0.9 0.8 0.9
0
0.4 0.4 0.6 0.8 0.9 0.5 0.7
[1] 5t6x.a 0.7 0.9 0.8 0.7 0.8 0.5 0.8 1.1 0.8 0.8 1.0 0.8 0.9 0.4
0
0.5 0.7 0.8 0.9 0.6 0.8
[1] 5t6y.a 0.7 0.9 0.8 0.7 0.8 0.6 0.8 1.0 0.8 0.9 0.9 0.8 1.0 0.4 0.5
0
0.7 0.8 0.9 0.6 0.8
[1] 5t6z.a 0.7 0.9 0.8 0.8 0.8 0.5 0.6 0.9 0.6 0.9 1.0 0.6 0.9 0.6 0.7 0.7
0
0.6 0.8 0.7 0.6
[1] 5t70.a 0.8 1.0 0.9 0.9 0.9 0.7 0.8 1.1 0.4 0.9 1.0 0.3 0.8 0.8 0.8 0.8 0.6
0
0.8 0.8 0.8
[1] 5u98.a 0.7 0.9 0.8 0.8 0.8 0.8 0.8 0.8 0.9 0.9 1.0 0.8 1.1 0.9 0.9 0.9 0.8 0.8
0
0.8 0.9
[1] 6bxp.a 0.6 0.8 0.7 0.7 0.7 0.6 0.8 1.0 0.8 0.9 1.0 0.8 1.0 0.5 0.6 0.6 0.7 0.8 0.8
0
0.6
[1] 6bxq.b 0.7 1.0 0.8 0.8 0.8 0.6 0.8 1.0 0.8 0.9 1.1 0.8 1.0 0.7 0.8 0.8 0.6 0.8 0.9 0.6
0
[Binding site full-atom RMSD matrix]







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[ENTRY 2D visualization]

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